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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [821 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | L 1 (B) | non-polymer(BES) | 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID | 211Q 213Q(E) 351A(S) 352G 353A 354M 355E 388H 389E 392H 411E 415S(K) 418E (identity: 76.9 %/34.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3mdj_B_1 identity=34.2% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * * : 3mdj_B_1 13:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 102 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEE SS SSTT EE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebeebebbbebebee-----eebebebebebebeeebebbbbbbeeb-----eeeebbbbeeeeeeeeeeebeeeeeeebebbbbebeee: queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** : 3mdj_B_1 103:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 198 SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TT EE-EEEEEE TTT GGGTS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEEE---: ExpBur :beeeeebebbbebebebbeeeebbbbbebebeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbebbbbbebeeebebbbbbeeeeeeeeeeeebbb---: Contact : b b queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****: 3mdj_B_1 199:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 293 SecStr :---EE SB GGG EEEE EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHTS SSSEEEEEEETT S EE TTEEEEEG: ExpBur :---bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbbbbeb: Contact : bbbbb queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464 : **** ** * * ************** ************* * * * * **** ** : 3mdj_B_1 294:SALLFDAEKSSASSKLDITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSS---XXXXXXXXX: 389 SecStr :GGT TT S HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG THHHH-HHHHHHHHHHHTSS ------------: ExpBur :ebbbeeeeeeebebebebbbbbbbbbbbbbbbbbbbbeebebbebbbbbbbbbbbbbbeeebeebebeebb-beebbebbeebbeeee------------: Contact : bb b b b b queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIMNRWT: 544 : * ** *** * ** ** * ** * ** * ** *** * ** **: 3mdj_B_1 390:XXXXXXXXDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMMNTWT: 489 SecStr :-------- HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHTT ----------------------------- HHHHHHHHH: ExpBur :--------eeeebbbbbbbbbbbeebbeeebbeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebbebbe: queryA 545:LQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRK: 641 :** *** ** * * *** * * ** * * * * ** * *** * * * : 3mdj_B_1 490:LQRGFPLITI-TVRGRNVHMKQEHYM----KXXXXAPDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDS: 583 SecStr :SSSS EEEEE-EEETTEEEEEEEE ---- ---- EEEEEEESS SS EEEEE SSE-EEEE SS S EEESGGG SSSEEEETTTHHHH: ExpBur :eeebbbbbbb-eeeeeebebebebbe----e----eeeeeeebbbbbbbbbeeeeeeeebbbeeee-eebebeeeeebbbbbbbbebbbbbbbeeeebee: queryA 642:IQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTN: 738 : * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 3mdj_B_1 584:LTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQ: 678 SecStr :HHHHHHHHGGGS HHHHHHHHHHHHHHHTTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH-----HH : ExpBur :bbebbeeebeebebbbbbbbbbbbbbbbeeeebebeebbebbebbeebeebbbbebbbeebeebbebbbbeeeeebbeebbebbbebbeebb-----eeb: queryA 739:NWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKEL: 838 : * ** * * * * * * * * * *** * ** : 3mdj_B_1 679:TWTD-EGSVSERMLRSELLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNK: 775 SecStr : SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHTTTS S HHHHHHHH--HHHTTSHHHHHHHHHHHHS TT HHHHHHHHHHTT S H: ExpBur :ebee-eebbbebebbbebbbbbbebebeebbeebeeebeebeeeeeeeebeebbbbbbb--bbbbeeeebbebbbebbeeeeeeeebebbbebbbbbeee: queryA 839:WILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALE: 938 : * * * * * * * * * * * ** ** * * * *** * : 3mdj_B_1 776:EKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKXXXXSSSIAHMVMGTTNQFSTRTRLEEVKXXXXXXXXX--XXXXXCVQ: 873 SecStr :HHHHHHHHHTTSTTT TTTHHHHHHHHHSSTTTHHHHHHHHHHTHHHHTT ---- SSHHHHHHHHTT SHHHHHH ---------------- TH: ExpBur :eebeebbebbeeeeebeeebbeebbbbbbebbebbebbbebbeeeeeebeee----eeebeebbebbbebbbeeeebeeee----------------eee: queryA 939:QALEKTKANIKWVKENKEVVLQWF: 962 :* * ** * * * : 3mdj_B_1 874:QTIETIEENIGWMDKNFDKIRVWL: 897 SecStr :HHHHHHHHHHHHHHHHHHHHHHHT: ExpBur :ebeebbeebbebbeebbeebeebb: |