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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [900 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | L 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 450A(N) 547M(K) 571D(E) 578S(L) (identity: 0.0 %/36.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5k1v_A_1 identity=36.8% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 5k1v_A_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SS SSS EEEEEEEEEEETTTTE-----EEEEEEEEEE S SEEEEE S EEEEEE BSSSGGG SS B EEEEEGGGTEEEEE S-S : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebebeebeebeeeeeebeebebeeebbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5k1v_A_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STT BEEEEEEEE SS EEEESS- EEEEEE SSS : ExpBur :eeee--------bbbebebebebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5k1v_A_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------ebeebbebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 5k1v_A_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEHHHH TTT HHHHHHHHHHHHHHHHHHHBTTTBEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbeebbebbee: Contact : b queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNN---------RSIQLPTT-----------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * * * : 5k1v_A_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCXXXXXXXXGVCHSXXXMTSNMLAFLGENAEVKE: 536 SecStr : --- SHHHHHHT STTTTHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHS -------- S --- TTSHHHHHHHHHHHH: ExpBur :b---eeeeebbbbbeebbebbbbbbbbbbeeebeeeebbebbbebbeebeeebbebeebbebbbebe--------eeeee---eeeeeeebeeebeebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 5k1v_A_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHHS S EEEEEEEETTEEEEEEEE SS TTSTT---TTTTTTT EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS E: ExpBur :bbebbbebebbbbbbbeeeeeebebebbbbbbbbbeeeee---beebbeebebbbbbbbbbeeeeeeeeebbeeee-eebebeeeeebbbbbbbbebbbb: Contact : b b b queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 5k1v_A_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEEETTHHHHHHHHHHH GGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHGGGGGT HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTTHH: ExpBur :bbbeeebbeebbebbeeebeebeeebbbbbbbbbbbbbbbebbebeebbebbebbeebeebbbbebbbebbeebbbbbebeebeebbebbbebbbebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 5k1v_A_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HT SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHHH HHHHHHH: ExpBur :bb-----eeeebbe-eeebbebbbbeebbebbbebebeebeeebeebbeebeebeeeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbeebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 5k1v_A_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHHT HHHHHHHHHHHHH SSS GGGHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHHHSSS: ExpBur :bbbbbbbeeeebbeebbebbbeeeebbbbbbbebbebbbebeebbebbbebbeeebeebeeebebbbebbbebbebbbebbbbeebbeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 5k1v_A_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--S THHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH: ExpBur :--ebebebbebbbbbbebbbebbeebbeebeebbeebee: |