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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [904 aa] | Aminopeptidase N :AMPN_CANLF | |
2 | b | I 1 (I) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 239H 241K(S) 243L 255S 257P 265N (identity: 83.3 %/78.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7u0l_A_1 identity=78.2% |
queryA 67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166 :*** ** **** ** * ** ********** ** ************* * *********** ** ** ******** * ** ***** ********: 7u0l_A_1 3:QSKPWNHYRLPKTLIPSSYNVTLRPYLTPNSNXLYTFKGSSTVRFTCKESTSMIIIHSKKLNYTNIQGQRVALRGVGGSQAPAIDRTELVEVTEYLVVHL: 102 SecStr :TTSGGGSSS TTEEEEEEEEEEEEE S - EEEEEEEEEEEESS SEEEEE SS EEE BTTBSEEEEESTT EEEEEEETTTTEEEEEE: ExpBur :eeeebeeeebeebbebebbebebbbebeeeee-ebebbbebebebbbeeebebbbbbbbebebeeeeeeebebeeeeebeebebeebeebeebbbbbbbb: queryA 167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266 : * ******* ***************** * * ** ************************ ******** * ******* *** * * *****: 7u0l_A_1 103:REPLQVNSQYEMDSKFEGELADDLAGFYRSEYTENGVKKVLATTQMQAADARKSFPCFDEPAMKATFNITLIHPSNLVALSNMLPRGPSVPFTEEPNWNV: 202 SecStr :SS TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE TGGGHHHHS B TTS BEEEEEEEEETTSEEEESS BSSS EE SSSTTEEE: ExpBur :eeebeeeeebbbebebbbebbeeebbbbbbebebeeeeebbbbbbbbbbbbbbbbbbbbbbebbbebbbbbbbbeebebbbbbeeeeeeeebeeeeebbe: Contact : b b b b b b queryA 267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366 :*** *** ******* ***** * *********** *** *** ****** ** ******** ***** ******************* : 7u0l_A_1 203:TEFETTPIMSTYLLAYIVSEFKNVQENTPSNVLIRIWARPSAMDQGHGNYALRVTGPILDFFSRHYDTPYPLNKSDQIALPDFNAGAMENWGLVTYRESA: 302 SecStr :EEB SB GGG EEEE EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTT SSSEEEEEEESS TT EE TTEEEEEHHH: ExpBur :bebeebeebbbbbbbbbbbebbeeeeebeeebbbbbbbeeebbeeebbebbbebbbebbebbbebbebebebebbbbbbbeebeeebbbbbbbbbbebeb: queryA 367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466 :** ** *** *********************** ********************************* *** ***************** **** ****: 7u0l_A_1 303:LLYDPQSSSIGNKERVVTVIAHELAHQWFGNLVTLEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLIVLNEVYRVMAVDALASSHPLSSPASEVNTPA: 402 SecStr :H TTT HHHHHHHHHHHHHHHHTTTTTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSGGG GGGTHHHHTHHHHHHHHTSTT S GGG SHH: ExpBur :bbbbeebbebeeebbbbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbeebbeeebebbbeeeeebeeee: queryA 467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRS-IQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565 :**** ** ***************** ** ** * *************** ** *** * * * ** ** ** ** ******* **** ****** *: 7u0l_A_1 403:QISEVFDSISYSKGASVLRMLSSFLTEDLFKKGVASYLHTFAYQNTIYLDLWNHLQWALGNQTAINLPYTVNAIMDRWILQMGFPVVTVDTTTGTLSQKH: 502 SecStr :HHHTTSSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHSTTEEE HHHHHHHHHHHHHT SS SS HHHHHHHHHSS S EEEEEETTTTEEEEEE: ExpBur :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbebbeeeeeebbebebbbebbeebbeeeeeeeeeeebebbbbbbbebbbbbbbebebeebebebeb: queryA 566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLID-VRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664 :***** ******* *** ** ** * * ** ** * ***** * * ************* **** ** ** **** * * ******** * *: 7u0l_A_1 503:FLLDPQSNVTRPSKFNYLWIIPISSVKSGTQQAHYWMPDNAKVQNDLFKTTGDEWVLLNLNVTGYYLVNYDQNNWKKIHTQLQTDLSVIPVINRAQVIHD: 602 SecStr : SSSS TTTT EEE EEETTEE EEE SSSEEE GGG TT EEESGGG SS EEEE HHHHHHHHHHHHH STTS HHHHHHHHHH: ExpBur :bbbeeeeeeeeebebebebbbbbbbbbeeeebeebbbbeeeebeeeebebeeeebbbbbbebebbbbbbbbeebbebbbebbeeebeebeebbbbbbbbb: queryA 665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764 : * **** ******** **** * ******************************* ******* ** * ** * * ** * ** **** *: 7u0l_A_1 603:TFDLASAQIVPVTLALNSTLFLNQETEYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLRKQVTPLFNHFEKITQNWTDHPQTLTEQYNEINAVSTACTYG: 702 SecStr :HHHHHHTTSS HHHHHHTTSGGGS HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHHHTT: ExpBur :bbbbbebeebebebbbebbebbeebeebbbbebbbebbeebebbbbeeebbebbeebbebbbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe: queryA 765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864 :** * ** ** * ** **** ******************** * ****** ********* ***** ************* ***** ** : 7u0l_A_1 703:VPKCKDLVSTLFAEWRKNPQNNPIYPNLRSTVYCNAIAQGGEEEWNFVWEQFRNTSLVNEADKLRSALACSTQVWILNRYLSYTLNPEFIRKQDVISTLS: 802 SecStr : HHHHHHHHHHHHHHHSSSSS S TTTHHHHHHHHHHHS HHHHHHHHHHHTT HHHHHHHHHHGGG HHHHHHHHHHHTSTTTS HHHHHHHHH: ExpBur :beebbebbeebbeebeeeeeeeebebbbbebbbebbbeeebeeebebbbeebeeeeeeebbebbbebbbbbeeeebbeebbebbeeeeebeeebbbebbe: queryA 865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964 :** ***** * *** ******** *** **************** ********* * ***************************** ***** *: 7u0l_A_1 803:SIASNVIGQSLAWDFIQSNWKKLFEDYGTXXXSFSNLIQAVTRRFSTEFELQQLEQFKANNMDTGFGSGTRALEQALEKTKANIKWVKENKEAVLQWFRE: 902 SecStr :HHHHSHHHHHHHHHHHHHTHHHHHHHHT --- HHHHHHHTTSS SHHHHHHHHHHHHHTTTT GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbebeebbebbbebbeeebebbeeebbe---ebeebbebbbebbbeeebbeebeebbeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee: queryA 965:NSK: 967 :** : 7u0l_A_1 903:NSQ: 905 SecStr :TTT: ExpBur :eee: |