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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [860 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN | |
2 | b | D 1 (D) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 288D(K) 289Y(N) 292K(S) 303W(Y) (identity: 0.0 %/36.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5c97_A_1 identity=36.4% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 5c97_A_1 40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL: 128 SecStr : SSS SSB EEEEEEEEETTT-----TEEEEEEEEEEEBSS EEEEEEE S B S----- B B SS S B EEEEETTTTEEEEEEEE-EE: ExpBur :eeeeebbebbebeebbbbbebebee-----eebebebebebebeeebebbbbbbeebeee-----ebbbeeeeeeeeeebeeeeeeeebbbbbebee-eb: queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * * **: 5c97_A_1 129:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 225 SecStr : TT EEEEEEEEEEE BSSSSEEEEEEEE SSS EEEEEEEE TTTTHHHHS B SSSS BEEEEEEEEESS EEEESS- EEEEEE --TTSEEEEEE: ExpBur :eeeeebebbbbbebebeeeeebbbbbebeeeeeeebbbbbbbbebbbbbebbbbbbbbebbbbbebebbbeeebebbbbb-eeeeeeee--eeebbebeb: queryA 270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369 : ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** ** : 5c97_A_1 226:SESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 322 SecStr : SB GGG EEEE B -EEEETTEEEEEEE GGGGGG H--HHHHHHHHHHHHHTTTS SEEEEEEESSTT TTEEEEEGGGT : ExpBur :eebebbbbbbbbbbbbebeee-eeebeebebbbbbbeeebeebe--bbbebbbebbebbeebbebebebebbbbbbbbbeebbebbbbbbbbbeeeebeb: Contact : bb b b queryA 370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465 :* ** * *************** ************ ** * * * * * * **** * * : 5c97_A_1 323:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 414 SecStr : TTT HHHHHHHHHHHHHHHHHHHBTTTBEESSGGGHHHHHHHHHHHHHHHHHHH----- TTS HHHHHHHHHHHHHHHHSSSS S --- SS: ExpBur :eeeebbbeebbebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeee-----beebbbbbbbbebbbebbeebbbebbeebb---eebeee: queryA 466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** * *: 5c97_A_1 415:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 509 SecStr :HHHHTT HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTSEE THHHHHHHSS SSS----- SS TTSHHHHHHSSS EEEEEE SS EEEE: ExpBur :eebeebeeebbbebbbbbbbbbbeebeeeebbebbbebbeeeeeeebebeebbebbbebeee-----eeeebebbebbbebbbbbbbbbebeeebbebeb: queryA 564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* * * * * * * ** * * ** * * *** * * * ** ** : 5c97_A_1 510:ERFFLNM-XXXXXXSDTSYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 608 SecStr :EE ------- EE EEEE GGG EEEE EE SSEEE SS SEEEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH: ExpBur :ebbebee-------eeeeeebbbbbbbbbbeeeeeeeeeeeebeeeeeeeebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebbbbbbb: queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751 :** * ** *** * * * * ** * * * * ** * * * ** * : 5c97_A_1 609:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 702 SecStr :HHHHHHHHHHSSS HHHHHHHGGGGGG HHHHHHHHHHHH---HHHHHHHHSS H-HHHHHHHHHHHHHTHHHHHT SS S HHHHHHHHHHHH--: ExpBur :bbbbbbbbbbeebebbebbebbebbeebeebbbbebbbebbe---ebbbbbbbbeee-ebbeebbeebbebbeebbeebebeeeeebbebebbebbbe--: queryA 752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851 : ** * ** ** ** * * * * *** * * ** : 5c97_A_1 703:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 793 SecStr :-------HHHHTT STHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHTT TTHHHHHHHHHHT HHHHHHHHHHHHHT: ExpBur :-------bbbebebeebbebbeeebeebbeeeeeeebbbbbbbbbb--bbbbeeeebbeebbebbeeeeebeebebbbebbbbbeeeebbeebbebbbee: queryA 852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951 :* * * * * * **** ** ** ** * * *** * * * * * *** ** * : 5c97_A_1 794:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 891 SecStr :SSS TTTHHHHHHHHHHSHHHHHHHHHHHHHTHHHHHHHS TTSTTHHHHHHHHHTT HHHHHHHHHHHHTT HHHH--T HHHHHHHHHHHHHHHHH: ExpBur :eebeeebbbebbebbbeeeebbeebbebbeeebeebeeebeeeeeebebbbebbbebbbeeeebeebeebbeeeeeebb--ebeebeebbbebeebebbb: queryA 952:KENKEVVLQWF: 962 : * * : 5c97_A_1 892:EKNLKSLTWWL: 902 SecStr :HHHTTTGGG : ExpBur :eebbebbeeeb: |