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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [901 aa] | Aminopeptidase N :AMPN_PIG | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [6 aa] | CLEAVED poly-Ala | 352G 353A 366S(A) 381R 384T 385V 388H 389E 418E 419Y 437L(P) 438N(G) 439D 442R (identity: 78.6 %/79.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4nz8_A_1 identity=79.7% |
queryA 68:SKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLK: 167 :** ******* ** **** ********** *** *** * *** * * ************** *** ******* ** * ** ***** *********: 4nz8_A_1 1:SKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHLK: 99 SecStr : GGGSSS SSEEEEEEEEEEEE S TTS EEEEEEEEEEEESS EEEEEEE S EE - SSSS EEEESTT EEEEEEETTTTEEEEEEE: ExpBur :eeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeeeebeebeebeebbbbbbbbe: queryA 168:GSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267 :*** *** *** ******************** ** ****** **************** ******** ******* *** **** ***** **: 4nz8_A_1 100:GSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVT: 199 SecStr :EEE TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B STTS BEEEEEEEEETTSEEEESS BSSS EE TT TTEEEE: ExpBur :eebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbbb: queryA 268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367 :** *** ******* ***** * * *********** *** *** ************** ** * ********* ******************** *: 4nz8_A_1 200:EFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENAL: 299 SecStr :EB SB GGG EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT TT EE TTEEEEEHHHH: ExpBur :ebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebebebbbbbbbbebeebbbbbbbbbbbebebb: Contact : bb b queryA 368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 467 :**** *** ************************ ********************* ********** * ***************** *** * *****: 4nz8_A_1 300:LFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQ: 399 SecStr : TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT S GGG SHHH: ExpBur :bbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebeee: Contact : b bb bb bb bbb b queryA 468:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEHF: 566 :*** ** ********* **** ** ** ** ******* ****** ** ** *** ** ** ** *** ** *************** ** ** **: 4nz8_A_1 400:ISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKHF: 499 SecStr :HHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SS SS HHHHHHHHHSS EEEEEETTTTEEEEEE : ExpBur :beebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebebb: queryA 567:LLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDA: 665 :*** ***** * * * ***** ** * * *** ** ****** * ***** ***** ***** *** ** *** * ******** * * : 4nz8_A_1 500:LLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDS: 599 SecStr : SSTT S TTTT EEE EEETTEE EEE SSSEEE GGG TT EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHHH: ExpBur :bbeeeeeeeeebeeebbbbbbbbbbbeeeeeeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbbb: queryA 666:FNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGV: 765 :**** ** ******* ***** * **** ********* ************* ** *** *** ** * ** * ********** ********** : 4nz8_A_1 600:FNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGL: 699 SecStr :HHHHHTTSS HHHHHHTTGGGGG SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHHHTT : ExpBur :bebbebeebebebbbbbbbbbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebeb: queryA 766:PECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIIS: 865 :* ** ** *** * *********** ********* ***** * * ********* ***** * * ***** ***************** *: 4nz8_A_1 700:PQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTINS: 799 SecStr :HHHHHHHHHHHHHHHTSTTS S GGGHHHHHHHHHHH HHHHHHHHHHHHH SHHHHHHHHHHHTT HHHHHHHHHHTT TTTS GGGHHHHHHH: ExpBur :eebeebbeebbeebeeeeeeeebebbbbebbbebbbbeebeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbbe: queryA 866:ITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTEN: 965 :* ***** * ************ ************** ****** * ********** * ******************************* ** * : 4nz8_A_1 800:IASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIEH: 899 SecStr :HHHSTTHHHHHHHHHHHHGGGGTTSSSSS HHHHHHHHHTT SHHHHHHHHHHHT SS GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebeeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbeee: queryA 966:S: 966 :*: 4nz8_A_1 900:S: 900 SecStr : : ExpBur :b: |