[pdbjlvh2]Protein Model on 7msw_A_1 focusing on 6-th site

#WARNING:no index is registered index "YP_009725298.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725298.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7msw_A_1 focusing on 6-th site

Protein Model on 7msw_A_1 focusing on 6-th site (TEMPLATE: 7msw )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

FOCUSED SITES		template(7msw_A auth_asym_id:A)
SiteNum	AA	label_ seq_id	auth_ seq_id	AA	Sec	Exp/Bur	RelAcc
6	V	6	6	V	E	b	0.0

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [635 aa]	Non-structural protein 2 :R1AB_SARS2

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7msw_A_1 identity=100.0%

queryA         4:RYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKT: 103
                :****************************************************************************************************:
7msw_A_1       4:RYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKT: 103
SecStr          :  EETTSB TTSSB HHHHHHHHHTT TTS HHHHHHHHHHTTGGGSSSS    EEEEEEE SS GGG  GGGEEEEEE TT  S     SS TTEEEEE:    
ExpBur          :eebbebbbbeebbbeebbeebbeeeeeeebebeebbebbeeeebeebbeeeebebbbebebbeebbbebebbbbeebeebeebeeebeebbbbbebebee:    

queryA       104:IQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHS: 203
                :****************************************************************************************************:
7msw_A_1     104:IQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHS: 203
SecStr          :      SS   HHHHHHHHHS  SSGGG EE  EEEEEE TTT  EEEEEE SSEEE TTT  EEE  SS EEE S  TTEEEEEE HHHH TTT SS  :    
ExpBur          :eeeeebeeeeeebbeebeebbebeebeebeebbbbbebebeeeeeebbbbebbeebebbebeeebeeeebbbbbbbebebbbbebebebbeeeeebeebe:    

queryA       204:LAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSAS: 303
                :****************************************************************************************************:
7msw_A_1     204:LAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSAS: 303
SecStr          :HHHHHHHH    EEETTEEEEEETTEEEEEEEEETTEEEEEEEEEEESSTT   EESTTHHHHHHHHHHHHSSSSEEEEEESS  B HHHHHHHHTT SS:    
ExpBur          :eeebbeebebeeeeeeeeebbebbbbbbbbbbbeeeebbbbbebbbebbbebbbbbbeebeeebeebbebbeeeebebbbeeebebbbbbbbbbbeebee:    

queryA       304:TSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDA: 403
                :****************************************************************************************************:
7msw_A_1     304:TSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDA: 403
SecStr          :HHHHHHHTTT  HHHHHHHHHTTSSEEEEEES  TTSEEESS   S SSTT   SHHHHHHHHHTT     SS  HHHHHHHHHHHHHHH TTHHHHHHH:    
ExpBur          :beebbeebeebebeebeeebeeeeebebeeeeeeebbbebeeeeebbebbbbbbbebbebbbbbbbbebeeeeeebeebbeebeeebeebbeebeebbeb:    

queryA       404:MMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVN: 503
                :****************************************************************************************************:
7msw_A_1     404:MMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVN: 503
SecStr          :HHHHS B    HHHHHHHHTTHHHHHHHHHHHHHSS  TTTHHHHHHHHHHGGGGGGGHHHHHHHHHHHHT   EEETTEEE  SS   HHHHHHHHHHH:    
ExpBur          :bbeebebebebebbbbbbbbebbeebbebbeebbeeebeebeebbeebeebbeebeebbeebbbbbbbbeeeebebebbebeeeeeeeeebbeebbebbb:    

queryA       504:KFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPV: 603
                :****************************************************************************************************:
7msw_A_1     504:KFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPV: 603
SecStr          :HHHHTTEEEEEETTEEEEEEESSS EEETTTEEEEEEEEEGGGT  B  TTS SEEEEEEE EE    S SB EEE   EEE S  TT SS     EEEE:    
ExpBur          :eebeebeeebebbebebebbebeebbbbebebebeebeeeeeebebebeeebeeebebbeeebeebeeeeeebeeeeeebebbeebeeebebeeeebebb:    

queryA       604:CINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGG: 638
                :***********************************:
7msw_A_1     604:CINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGG: 638
SecStr          :EETTEEEEEETTSS EEEE TTS EEEEEEEETT :    
ExpBur          :bbebbbbbebeeeebbbbbbeebebbbbbbebeee:

Protein Model on 7msw_A_1 focusing on 6-th site (TEMPLATE: 7msw )

Input Residue Numbers for Focused Sites