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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(VME1_SARS) | F 1 (B) | polymer(polypeptide(L)) [198 aa] | Membrane protein :VME1_SARS2 | |
2 | b | D 1 (F) | polymer(polypeptide(L)) [220 aa] | YN7756_1 Fab heavy chain | 137L 179K 180L 181G 182A 183S 196N(S) 197R 198Y (identity: 88.9 %/91.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7vgr_F_1 identity=91.4% |
queryA 8:TVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRS: 107 :****** ************** ** ****** *********** *********************** ********** ********* ***********: 7vgr_F_1 33:TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRS: 132 SecStr : HHHHHHHHHHHHHHHHHHHHHHHHHHT TTT HHHHHHHHHHHHHHHHHHHHHHHHHHHS SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS : ExpBur :eeeeeeeeeeeeeeeeeeeeeeeeebeeebeeeeeeeebeebbeeeeeeeeeeeeeeeeebeeeeeeeebeebeeebeeebeeeeebeeebeebeebbeb: queryA 108:MWSFNPETNILLNVPLRGTIVTRPLMESELVIGAVIIRGHLRMAGHSLGRCDIKDLPKEITVATSRTLSYYKLGASQRVGTDSGFAAYNRYRIGNYKL: 205 :**************** *** **** ********** ***** *** ******************************** ******* *********: 7vgr_F_1 133:MWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKL: 230 SecStr :GGGG TT SEEEEEESSSSEEEEEESS SEE TTT EEETTEEEE SS S EEEE SSS EEEEEE B SSS B EEEEEE S : ExpBur :eebbbeebebbbbbebeeeeebeebeeeeeebebebeebebebeeeebeebebebbeebbbbbeeeebbbbeeeeeeeeeeeebebbbeeeeeeeeee: Contact : b bbbbb bbb |