Protein Model on 7zh5_B_1_C_1
(TEMPLATE: 
7zh5
)Protein Model on 7zh5_B_1_C_1
(TEMPLATE: 7zh5
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [926 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [962 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | 42Y 45E 46I 47F 218P 269N 271T 719D 722M 737Q 738Y 739G 740S 741F 744Q 747R 768K 769Q 770M 771Y 772K 776L 779F 835Q 836K 837F 838N 839G 845P 846L 848T 851M 855Y 865T 866A 872A 874A 875A 876L 877Q 878I 879P 882M 886Y 889N 895Q 896N 899Y 902Q 945V 960N 994L 1001R 1012S 1013E 1021R (identity: 100.0 %/90.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7zh5_B_1 identity=90.2% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** **************************** ***************:
7zh5_B_1 18:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSXXXXXXXXXXIINNSTNVVIRACNF: 117
SecStr : EEESB B S S EEEEEEEE TTEEE B ------- EE SS EEEEE SS TT EEEE ---------- B SSSS B S :
ExpBur :eeeebbeebbeeeeeeebeeeeeebeeebbbbeeebebee-------eeebebeebbbebeeeeeeebbbeeeee----------eeeeeeeeeeeeeee:
Contact : b bbb
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVR-----------------------: 207
:*************** :
7zh5_B_1 118:ELCDNPFFAVSKPMG--------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXX: 155
SecStr : SS TTT -------------------------------------------------------------------------------------:
ExpBur :eeeeeeeeeeeeeee-------------------------------------------------------------------------------------:
queryA 208:---------------------------------------DLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDE: 268
: ***************************** *******************:
7zh5_B_1 156:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPSGFNTLKPIFKLPLGINITNFRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDE: 255
SecStr :--------------------------------------- SB B EEEE ------------- EEEEE EEEEEEEEE T:
ExpBur :---------------------------------------ebeeeeeeeeeeeeeeeeeeeeebebbee-------------ebbbbbebeebebbbebee:
Contact : b
queryA 269:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 368
:****************************************************************************************************:
7zh5_B_1 256:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 355
SecStr :TS EEEEEETTS HHHHHHHHHT S SEEEEEEEEEB B S B THHHHT S BTTS EEEEE S B S HHHH SEEEESS:
ExpBur :ebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeebebebbeeeeeebebeebbeeeebebbebbeeeebeebbbebeebeeeeeeeeeebee:
Contact :b b
queryA 369:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCT: 468
:*********************************************************** ************************ :
7zh5_B_1 356:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNXXXXXXXXXXXKYRYLRHGKLRPFERDISNVPFSPXXXXXX: 455
SecStr :S GGGGGG BSSEEEEEEEE SSGGGGSSSS HHHHHT SS EEEEEEE ----------- SS TT ------:
ExpBur :bebeebeeebbbbbebbbbebeeeebeebbeeeeeebbbebbebeeebebbbbbbeeee-----------eebeebeeebeeeeeeeeeeeeee------:
queryA 469:PPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 568
: ****************************************************************************:
7zh5_B_1 456:XXXXXXXXXXXXXXXXXXXXXXXXPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 555
SecStr :------------------------ EEEEEEE SSSS BB S SS EEEBSSS EEE B TT B TTS EEETTTE:
ExpBur :------------------------eebbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbeebeeebbbeeeeeebeeeebeeeeeeeeebbbebeeee:
queryA 569:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRS: 668
:********************************************************************************************** :
7zh5_B_1 556:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXX: 655
SecStr :EE EEEEEEEES SSS S EEEEESS SSHHHHHHHTT BSS SS S EEEETTEEEES EE S B SEEETTTEEEE ------:
ExpBur :ebebeeeebebbbbbbbbbbeeeeebbbbbeebebeebbebbeeeebebebeeeebeeeeeebeebbbbebbeeeeeeebebebeeebbbbebe------:
queryA 669:TSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 768
: ************************************************************************************************:
7zh5_B_1 656:XXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 755
SecStr :---- EEEEB SS EEEE EEEEEEEEEE EEEE HHHHH SS HHHHHHHHTT SSHHHHHHHHHHHHHHHHHHHHHHHTT S:
ExpBur :----ebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeeeeebbebbeeeeeeeeebeeebeebbebbeebbeebbeebe:
Contact : b b bbbbb b b b
queryA 769:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 868
:******************************************* *************************************:
7zh5_B_1 756:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 855
SecStr :S S EETTEE TTTS TTSSSSS HHHHHHHHHS -------------------- TT EEEE SS HHHHHHHHHHHHHHHHSS S:
ExpBur :eeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee--------------------eeeeeeebbeeeeeeeeeeebbeebbbbbbbbbebbe:
Contact :bbbb b b bbbbb bb b b b bb
queryA 869:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 968
:****************************************************************************************************:
7zh5_B_1 856:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 955
SecStr : SSS SHHHHHHHHTTTT THHHHHTHHHHHHHHHHHHHHHHHHHHT S S HHHHHHHHHHHHHHHHHHHGGG SSSS SSSSSSSSSSTT:
ExpBur :ebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeebeebbeebeebeeebeeeeeeeeebeeeebeebeeebee:
Contact : b bbbbbb b b b bb b b b b
queryA 969:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1068
:****************************************************************************************************:
7zh5_B_1 956:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1055
SecStr :TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTSSSSSS EEEEEEETTEEEEEEEEEE EEEE S EESSSE:
ExpBur :eebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeee:
Contact : b b bb b
queryA 1069:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119
:***************************************************:
7zh5_B_1 1056:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106
SecStr :EEEESS EEE TTTS EEE SSS STTEEEEEETTTSSS EE :
ExpBur :bbeeeebbbbeeeeebebbbeebeeeeebeeeebeeeeeeeeeeeeeeeee:
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[assembly_id:1]
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