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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AP3A_SARS2) | B 1 (B) | polymer(polypeptide(L)) [192 aa] | ORF3a protein :AP3A_SARS2 | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [192 aa] | ORF3a protein :AP3A_SARS2 | 47I 48V 50V 51A 54A 55V 57Q 58S 61K 62I 64T 65L 66K 85L 88V 92S 96L 105F 108L 112V 115L 116Q 118I 119N 122R 144N 160Y 161N 162S 164T 165S 166S 168V 170T 173D 185Q 187G 188G 189Y 215Y 216S 218Q 222D 223T 225V 228V 230F 232I (identity: 100.0 %/96.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8eqj_B_1 identity=96.5% |
queryA 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 :****************************************************************************************************: 8eqj_B_1 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 SecStr : SHHHHHHHHHHHHHHHHHTT S SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHH: ExpBur :eeeeeeeeebeeebeeeeeebeeeeeeeeebbeebeebeeebeebeeebbebbeebbeeeeeeeeeeeebeeeeeebeeeeeeeeebeebbeebebebbe: Contact : bb bb bb bb bb bbb b b b b b b b bb bb b queryA 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVD: 238 :********************************** **********************************************************: 8eqj_B_1 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDXXXXXXXEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVD: 238 SecStr :H SEEEEEE SS EEEEEE S SEEEEEEE ------- EEEETTEEEE S SEEEEE SS EEEEEEEEEE HHHH TTEEEEEEEE : ExpBur :bbebeebbbbebeeebbbbbbeeeeeebebbbbe-------eeebebeeeebeeebeeeeebbbbbeeeeeebeeeeeeeeeeeeeeebbebebeeeee: Contact : b bbb bbb b b b b bbb bb b bb b b b b |