[pdbjlvh2]Protein Model on 2d2d_B_1_D

Protein Model on 2d2d_B_1_D_1 (TEMPLATE: 2d2d )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	B 1 (B)	polymer(polypeptide(L)) [302 aa]	3C-like proteinase :R1AB_CVHSA
2	b		D 1 (B)	non-polymer(ENB)	ETHYL (2E,4S)-4-[((2R)-2-{[N-(TERT-BUTOXYCARBONYL)-L-VALYL]AMINO}-2-PHENYLETHANOYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENT-2-ENOATE	3266T 3267L 3281H 3289M 3380F 3381L 3382N 3383G 3384S 3385C 3403H 3404H 3405M 3406E 3408P 3412H 3429Q 3430T 3431A 3432Q (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2d2d_B_1 identity=100.0%

queryA      3241:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK:3340
                :****************************************************************************************************:
2d2d_B_1       6:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPK: 105
SecStr          :          HHHHTTEEEEEETTEEEEEEEEEEEEEEEGGGS  SGGGSS  HHHHHHT  GGGEEEEETTEE  EEE  EETTEEEEEEEEEETT  E:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebbeeeeebebebeeebebbbebebeeebeebbe:    
Contact         :                         bb             b       b                                                   

queryA      3341:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI:3440
                :****************************************************************************************************:
2d2d_B_1     106:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTI: 205
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B :    
ExpBur          :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeeebeb:    
Contact         :                                       bbbbbb                 bbbb b   b                bbbb        

queryA      3441:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC:3540
                :****************************************************************************************************:
2d2d_B_1     206:TLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQC: 305
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHGGGTB    HHHHHHTHHHHHGGG  HHHHHHHHHHHHHHTTTT  BTTBSS   SS HHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeeeeebebeeebeeeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebbeeeebbbbbbbebbeebb:    

queryA      3541:SG:3542
                :**:
2d2d_B_1     306:SG: 307
SecStr          :T :    
ExpBur          :ee:

Protein Model on 2d2d_B_1_D_1 (TEMPLATE: 2d2d )

Input Residue Numbers for Focused Sites