[pdbjlvh2]Protein Model on 7lfu_A

Protein Model on 7lfu_A_1 (TEMPLATE: 7lfu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(R1A_SARS)	A 1 (D)	polymer(polypeptide(L)) [306 aa]	papain-like protease :R1A_SARS

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7lfu_A_1 identity=99.0%

queryA      1544:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS:1643
                :****************************************************************************************************:
7lfu_A_1       5:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS: 104
SecStr          : EEEEEESSSS  EEEEE TTS HHHHHSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    HHHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebbbbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebbebbb:    

queryA      1644:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE:1743
                :****************************************************************************************************:
7lfu_A_1     105:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE: 204
SecStr          :  S SS HHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHGGGB  TT EEEEEEE TTS SEEEEEEGGG:    
ExpBur          :beeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbbebeeeeeeeeeeeebe:    

queryA      1744:AVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV:1843
                :********************   *****************************************************************************:
7lfu_A_1     205:AVMYMGTLSYDNLKTGVSIPXXXGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV: 304
SecStr          :GSEEES S HHHHHH EE  ---    EEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbbeebbbbeebeeebeee---eeebebebeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbbeebbbebbbeeeeebeebebebbbb:    

queryA      1844:FYKETSYTT:1852
                :*********:
7lfu_A_1     305:FYKETSYTT: 313
SecStr          :EEE SEEE :    
ExpBur          :bbebeeeee:

Protein Model on 7lfu_A_1 (TEMPLATE: 7lfu )

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