[pdbjlvh2]Protein Model on 2alv_A

Protein Model on 2alv_A_1 (TEMPLATE: 2alv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(R1A_SARS)	A 1 (A)	polymer(polypeptide(L)) [302 aa]	Replicase polyprotein 1ab :R1AB_CVHSA

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2alv_A_1 identity=100.0%

queryA      3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341
                :****************************************************************************************************:
2alv_A_1       2:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 101
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  SS SSS  HHHHHHT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  SE:    
ExpBur          :ebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeeeeeeebebeeeeeebebeeeeeeebbbebebeeebeeebee:    

queryA      3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441
                :****************************************************************************************************:
2alv_A_1     102:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 201
SecStr          :EE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B H:    
ExpBur          :eeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeebeebb:    

queryA      3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541
                :****************************************************************************************************:
2alv_A_1     202:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 301
SecStr          :HHHHHHHHHHHHHT  SS  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS   S  HHHHHHHH :    
ExpBur          :bbbbbbbbbbbbeeeeebbeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeeeeebbbbbbbebbeeebe:    

queryA      3542:GV:3543
                :**:
2alv_A_1     302:GV: 303
SecStr          :  :    
ExpBur          :ee:

Protein Model on 2alv_A_1 (TEMPLATE: 2alv )

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