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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [230 aa] | Thrombin heavy chain :CTRA_BOVIN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [13 aa] | Thrombin light chain :CTRA_BOVIN | 260E 263L(V) 264P 266A(S) 267W 268P 269W 359D(Q) 360L(T) 363P(A) 364V 365C 378L(T) 380W(V) 399A(Q) 401K(S) 451N(G) 452I(A) 453W (identity: 42.1 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1dlk_B_1 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353 :** ** * ** ******* * **** * * ****** ** * * ** * * * **** * ** : 1dlk_B_1 1:IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLST: 95 SecStr : BT EE TTSSTTEEEEE TTS EEEEEEESSSSEEEE GGG TTS-----EEEES SBTT S EEEEEEEEEE TT TTT S EEEEESS: ExpBur :bbeeeebeeeebbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----bbbbebbeeeeeeeeeeebebeeebebeebeeeeebbbbbbbebee: Contact : b bb bbbb queryA 354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452 : * * **** * *** * * * * * * * ****** * ** ******** ** : 1dlk_B_1 96:AASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGA: 191 SecStr : BTTB B TT TT EEEEEES SSTT SS SB EEEEEEEE HHHH--HHHHGGG TTEEEEE-- SS B TT TT EEEEEETTE: ExpBur :ebeeeeebeebeebeeeeebeeeeebbbbbbbbeeeeeeeebeebbbbebebbebeeb--eeebeeebeebbbbbb--eeebbbbebbbbbbbbbeeeee: Contact : bb bbb b b b b bb queryA 453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * * **** **** * * * : 1dlk_B_1 192:WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 230 SecStr :EEEEEEEEE TT TTSEEEEEEHHHHHHHHHHHHHH : ExpBur :ebbbbbbbbeeeebeeeebbbbbebbebbeebeebbeee: Contact :b |