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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [223 aa] | Trypsin, cationic :TRY1_BOVIN | |
2 | b | C 1 (A) | non-polymer(UIR) | (1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YL-1-CYCLOPROPYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE | 296H 340K(N) 341T 342K(L) 419L(Q) 435D 436S 438Q 441S 460S 461W 462G 464G 465C 472G (identity: 80.0 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1y3v_A_1 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * ** * * * **** * ** : 1y3v_A_1 1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA: 94 SecStr : BS EE TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SST-TS SS EEEEE----EEEEE TT TTT TT EEEEESS : ExpBur :bbeeeebeeeebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebbbbbbbb-eeeeeebbebee----eeebebeeeeeeebebbbbbbebeeeb: Contact : b bbb queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 : * * ** * ***** * * ** * * * * ** * *** * * ********** * * : 1y3v_A_1 95:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 186 SecStr : SSS B SS TT E--EEEEESS SSS SS EEEEEEB HHHHHH--HSTTT TTEEEES TTSS B TT TT EEEETTE----: ExpBur :eeeeebeebeebeeeeeeebe--bbbbbbbbeeeeeeeebeebebbebbbbeeeebee--ebeeebeebbbbbbbeeeeebbbebbbbbbbbbeee----: Contact : b bb b b queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * ******* **** * ** : 1y3v_A_1 187:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 223 SecStr :EEEEEEE SSSS TT EEEEEGGGGHHHHHHHHHT : ExpBur :bbbbbbbeeebbeeeebbbbbebbebbebbeebbeee: Contact : bbb bb b |