Protein Model on 5odg_A_1 focusing on 135-th site
(TEMPLATE: 
5odg
)Protein Model on 5odg_A_1 focusing on 135-th site
(TEMPLATE: 5odg
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(5odg_A auth_asym_id:A) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 135 | L | 128 | 135 | L | e | 117.4 | |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(SMAD3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [126 aa] | Mothers against decapentaplegic homolog 3 :SMAD3_HUMAN | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5odg_A_1 identity=100.0% |
queryA 11:IVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCE: 110
:****************************************************************************************************:
5odg_A_1 4:IVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCE: 103
SecStr :HHHHHHTT S HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHH SSS EEE TTS EEETTEEE HHHHHHHHHT TT GGGEEE TT T:
ExpBur :bbebbbeebeeeeeeeeeebbeebbeebbeebeeeebbebbeebbeeeeeebebbbbeeeeebebebeeeeebbbbbbbebbebeebeeeebbebeeebe:
queryA 111:FAFNMKKDEVCVNPYHYQRVETPVL: 135
:*************************:
5odg_A_1 104:FAFNMKKDEVCVNPYHYQRVETPVL: 128
SecStr :T GGG SEEE GGGEEE :
ExpBur :ebeeeeeeebbbbbbbbeeeeeeee:
|
[assembly_id:1]
[help]