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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | B 2 (B) | polymer(polypeptide(L)) [123 aa] | Mothers against decapentaplegic homolog :B3S7S5_TRIAD | |
2 | b | D 1 (D) | polymer(polydeoxyribonucleotide) [18 base] | DNA (5'-D(P*AP*TP*GP*CP*GP*GP*GP*CP*GP*CP*GP*CP*CP*CP*GP*CP*AP*T)-3') | 70S(T) 71L 75L 76Q 77V 78S(A) 79H(G) 81K (identity: 62.5 %/59.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5nm9_B_2 identity=59.8% |
queryA 23:QNGQEEKWCEKAVKSLVKKLK-KTGQLDELEKAITTQNVN-TKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCEFAFNMKKDEV: 120 :* * * ** ******* * ** * * * ** ** * ******* ** ***** * ******* ** ** *** * * *: 5nm9_B_2 25:QGGESENFAKRAVESLVKKLKDKRDELDALITAVTSNGIQQSKCVTIARTLDGRLQVAGKKGFPHVIYSRIWRWPDLHK-NELKHIKLCKFAFDLKLDHV: 123 SecStr : SSS HHHHHHHHHHHHHHTTT HHHHHHHHHHHHTTT S EEE TTS EEETTEEE HHHHHHHHHT TT T-T EEE TT TT GGGT SEE: ExpBur :eeeeeeebbbbbbeebbeebeeeeebbebbeebbebeeeeebebbbbeeeeebebebeeeeeebbbbbbebbebeebee-eebbeeeebeebbeeeeeeb: Contact : bb bbbbb b queryA 121:CVNPYHYQRV: 130 :******* **: 5nm9_B_2 124:CVNPYHYERV: 133 SecStr :E GGGEEE : ExpBur :bbbbbbbeee: |