CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [249 aa] | SMAD4 :SMAD4_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [221 aa] | SMAD4 :SMAD4_HUMAN | 238Y(F) 241N(D) 246E 247T 357N(A) 358Q(A) 359G 364Y(D) 367T(R) 390T(K) 397E 399H 401N(H) 404L 407L 408D 412T(H) (identity: 47.1 %/50.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1dd1_B_1 identity=50.8% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 1dd1_B_1 36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135 SecStr : SEEEEEEEEETTEE S EEEETT EEEEESS SSEEE SS TT HHHHHHHTT TT EEEEEETTTEEEEEE SSS EEEE HHHHHHTT: ExpBur :beebbbbbbbbeeeebeeebebeeeeeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebebebebebeebbbbebebbbeeee: Contact : b b bb queryA 326:WHPA-TVCKIPPGCNLKIFNNQE-----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTV: 389 : * * ** * * * * * * * * * * ********* * ** : 1dd1_B_1 136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIXXXXXXXXXAPAISLSAAAGI-GVDDLRRLCILRMSFVKGWGPDYPRQSI: 234 SecStr : TT EEEE TT EEEEE HHHHHHHHHHHHHHHHHHHHHHHHHSS --------- EE TTT-THHHHGGGGEEEEEES STTSS SG: ExpBur :eeeeebbbbbeeebebebbbbebbbebbeeebeebeeebeeebeeeeeee---------eeeeeeeeeeee-eeeebeebbbbebbbbebbbeeeebeeb: Contact : bbb b b queryA 390:TSTPCWIELHLNGPLQWLDKVLTQM: 414 : ****** ** ** ** ** *: 1dd1_B_1 235:KETPCWIEIHLHRALQLLDEVLHTM: 259 SecStr :GGSSSEEEEEEHHHHHHHHHHHTTS: ExpBur :eebbbbbbbebebbebbbeebeeee: Contact :b b b b b bb b |