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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [880 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | Q 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 115E(N) (identity: 0.0 %/36.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5j6s_B_1 identity=36.7% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 5j6s_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS TTEEEEEEEEEEEEETTTTE-----EEEEEEEEEEE S SSEEEE SS EEEEE EESS GGG TT EEEEETTTTEEEEE S-S : ExpBur :eeeeebbebbebebbebbbbbebeeee-----bebbbebbbebeeebebbbbbbeebeeeebebebeebeebeeebeebeebebeebbbbbbebe-eebe: Contact : b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5j6s_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :SS E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B SSSS BEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eeee--------bebbbebeeebeeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-beeeeeebeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5j6s_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEE SS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbbbeeeebebeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbeeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 5j6s_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEE GGGT TTT HHHHHHHHHHHHHHHGGGTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGTT-HHHHHHHHHHHSSSS S : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeeebeebebeeeb-bebbbebbebbbbebbbbbbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 5j6s_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVKE: 536 SecStr : --- SHHHHHHTSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE HHHHHHHTT ------------------------------ : ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbeeeeeeeebeebbbebbeebeeebbebebbbebbeee------------------------------eeee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 5j6s_B_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr : HHHHHS S EEEEEEBSSS B EEEEE SS TTSHH---HHHHGGG B TT B SSE-E SS S SSTT SS E: ExpBur :bbeebbebebbbbbbbeeeeeebebebbbbbbbbeeeeee---beebeeeeebbbbbbbbbeebeeeeeeebeeee-eeeebeeeeebbbbbbebebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 5j6s_B_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEEETTHHHHHHHHTTSSGGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHTTGGGT HHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHTTHH: ExpBur :bbbeeebbeebbebbeeebeebeebbbbbbbbbbbbbbbbebbebeebbebbbbbeebeebbbbebbbebbbebbebbebeebeebbebbeebbeebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 5j6s_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----TS SSS- S HHHHHHHHHHHHHTTTTT HHHHHHHHHHHHHHHTTTT S STTHHHHH--HHTTSSHHHHHHHHHHHHH HHHHHHH: ExpBur :bb-----eebeebe-eeebbebbbbbebbebbbebeeeebeeebeebbeebeeeebeeebbbbbbebbb--bbbbeeeebbeebbeebeebbbbbbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 5j6s_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHTT TTHHHHHHHHTTTTSSS GGGHHHHHHHHHTSSTTHHHHHHHHHTTHHHHHHHS TT HHHHHHHHTTTSS SHHHHHHHHHHHHHHTTT: ExpBur :bebbbbbeeeebbeebbebbbeeeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 5j6s_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--T THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS: ExpBur :--ebebebbebbbebbebbbebbeebbeebeebbeebee: |