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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [854 aa] | Leucyl-cystinyl aminopeptidase, pregnancy serum form :LCAP_HUMAN | |
2 | b | K 1 (K) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 730F 734R(Q) 766P(G) 767E(N) (identity: 25.0 %/36.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zyf_B_1 identity=36.1% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 7zyf_B_1 9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMXXXXSQEKQAEILEYAYHGQIAIVAPE-AL: 97 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE S EEE-----EEEE ---- B EEEEETTTTEEEEEEEE-EE: ExpBur :eeeeebeebbebeebbbebebebee-----eebebebebbbebeeebeebbbbbeebeee-----ebbbe----eeeeebeeeeeeebbbbbbebee-eb: queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * **: 7zyf_B_1 98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVLXDGLVQD--EF: 194 SecStr : TTEEEEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STTS BEEEEEEE SS EESS- B - EE--EB: ExpBur :eeeeeeebbbebebebeeebbbbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbebebbbeeebebbbbb-eeeeeeee-eeeeeb--eb: queryA 270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369 : ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** ** : 7zyf_B_1 195:SESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291 SecStr : SB GGG EEEE EEEE-EESSS EEEEEE TTTGGG S--HHHHHHHHHHHHHHHHSSS SSEEEEEEESS SSSB TTEEEEEHHHH : ExpBur :eebeebbbbbbbbbbbbbbeee-eeeeebebbbbbbeebeeebe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbbbbbbb: queryA 370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465 :* ** * *************** ************ ** * * * * * * **** * * : 7zyf_B_1 292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383 SecStr : TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHS-----SGGG THHHHHHHHHHHHHHHTSTT SS--- SH: ExpBur :eeeebbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbbebb---bebebe: queryA 466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** * *: 7zyf_B_1 384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478 SecStr :HHHHTTSSHHHHHTHHHHHHHHHHHS HHHHHHHHHHHHHTTTTEEE HHHHHHHHHHTTTT-----SS HHHHTHHHHHSSS EEEEEEEETTEEEEEE: ExpBur :eebbbbbbebbeebbbbbbbbbbeebeeeebeebbbebbeebeeeebebeebbebbbeebee-----eeebeebbebbbebebbbbbebeeeebebebeb: queryA 564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* * * * * * ** * * ** * * *** * * * ** ** : 7zyf_B_1 479:ERFFLNMXXXXXXXXX-SYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577 SecStr :EE ---------- EEEEEEEEETT EEEEEEEE SSEEEEE SS EEEEEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHH: ExpBur :ebbeeee----------eeebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebebbbbbbbeeebbebbbebbeeebeebebbbbbbb: queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751 :** * ** *** * * * * ** * * * * ** * * * ** * : 7zyf_B_1 578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671 SecStr :HHHHHHHHHHTSS HHHHHHHGGGGGG HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHSHHHHHT SSS S HHHHHHHHHHHH--: ExpBur :bbbbbbbbeeeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbeebbeebbebbeebbeebebeeeeebbebebbeebbe--: Contact : b b b queryA 752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851 : ** * ** ** ** * * * * *** * * ** : 7zyf_B_1 672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762 SecStr :-------HHHHTT TTHHHHHHHHHHHHTTTTS S TTSHHHHH--HHHTTSHHHHHHHHHHHTT TTTHHHHHHHHTT S HHHHHHHHHHHHHT: ExpBur :-------bbbebebeebbebbeeebeebbebeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbebbbee: Contact : bb queryA 852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951 :* * * * * * **** ** ** ** * * *** * * * * * *** ** * : 7zyf_B_1 763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860 SecStr :SSS GGGHHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT HHHHHHHHHHHHTS HHHH--T HHHHHHHHHHHHHHHHH: ExpBur :eebebbbbbbbbebbbebeebbeebbebbbeebebbeeebebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbbbbeebbebb: queryA 952:KENKEVVLQWF: 962 : * * : 7zyf_B_1 861:EKNLKSLTWWL: 871 SecStr :HHHHHHHHHH : ExpBur :eebbeebeeeb: |