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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [869 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4jbs_A_1 identity=36.0% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * : 4jbs_A_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEXXXYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SS SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS SEEEEE SS EEEEEEEEE --- SS EE EEEEEGGGTEEEEE S-S : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebebee---eeeeeeebeebebeeebbbbbbbe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 4jbs_A_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TT EEEEEEEE TTTTGGGTS B STT BEEEEEEEE SS EEEESS- EEEEEE TTS : ExpBur :eeee--------bbbbbebeeebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeebeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 4jbs_A_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbebeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 4jbs_A_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEHHHH TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGT-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbeebbebbbe: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 4jbs_A_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXLGENAEVKE: 536 SecStr : --- SHHHHHTT STTTTHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHH ------------------------- HHH: ExpBur :b---eeeeebbbbbeebbebbbbbbbbbbbeebeeeebbebbbebbeebeeebbebeebbebbbee-------------------------eeeeeebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634 : * **** * * * * * ** ** * * * * * ** * *** * *: 4jbs_A_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGXXXXXXXXXXXQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635 SecStr :HHHHHHHS S EEEEEEEETTEEEEEEEE ----------- S EEE BSS EEE SSE-EEEE SS S B SGGG SS EEEE: ExpBur :bbebbbebbbbbbbbbeeeeeebebebebbebe-----------eeebebebbbbbbbeeeeeeeeeebbeee-eeeebeeebebbbbbbbbbbbbbbbb: queryA 635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731 : * *** * * * * * * * ** * * * ** * * * ** * * ** * : 4jbs_A_1 636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734 SecStr :ETTHHHHHHHHHHS GGGS HHHHHHHHHHHHHHHTTTSS HHHHHTTTTGGGT HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTTHHHH-: ExpBur :eeebbeebbebbeeebeebeeebbbbbbbbbbbbbebeebebeebbebbebbeebeebbbbebbbebbeebbebbeeeebeebbebbbebbbeebeebb-: queryA 732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831 : * * ** * ** **** * ** * ** * * *: 4jbs_A_1 735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827 SecStr :----HT SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHTS S HHHHHHHH--HHHTTSHHHHHHHHHHHTT S HHHHHHHHHH: ExpBur :----eebebbe-eeebbeebbbeebbebbbebeeeebeeebeebbeebbeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbbebbbeb: queryA 832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931 :* ** * * * * ** * **** ** * ** * * ** ** * * *: 4jbs_A_1 828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925 SecStr :HHS HHHHHHHHHHHHHTSSS GGGHHHHHHHHHHSHHHHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHH SS--S: ExpBur :bbbbeeeeebeebbebbbeeeebebbebbebbebbbebeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee--b: queryA 932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 :* ** **** * * * : 4jbs_A_1 926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr : THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH : ExpBur :eebebbebbbbbbebbbebbeebbeebeebbeeeee: |