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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [696 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3qnf_A_1 identity=38.6% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGHRVVL--RGVGGSQPPDIDKTELVEPTEYLVVH: 165 :** *** * * ** * * * * * ** ** * ** * * * * * * * * : 3qnf_A_1 55:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGXXXXLSEEPLQVLEHPRQEQIALLAP-EPLLVG: 148 SecStr : SS TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE S EEEEEEEEE ---- EEEE EEEEEGGGTEEEEEEE-EEE BT: ExpBur :beeeebbeebebebbebbbebebee-----eebbbebebebebeeebebbbbbbbebebeebbbeee----eeebebeeeeeeeeebbbbebe-eebeee: queryA 166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * *: 3qnf_A_1 149:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 239 SecStr : EEEEE--------EEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE: ExpBur :eebbbb--------bebebebbeeeebbbbbebebeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbbbbbebebeeebebbbbbeeeeeeeeeeebbb: queryA 261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360 :* * * ****** *** * * * * ** * * * **** * * ****** * *** ******** : 3qnf_A_1 240:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 331 SecStr :E------EE SB GGG EEEE EEEEEE TT EEEEEE TTTG--GGGHHHHHHHHHHHHHHHHHHTS SSSEEEEEEETT SSEE TTEE: ExpBur :b------bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbb: queryA 361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460 :**** **** ** * * ************** ************* * * * * **** **** *** : 3qnf_A_1 332:TYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP--: 428 SecStr :EEEGGGT TTTS TTHHHHHHHHHHHHHHHHHBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT SS --: ExpBur :bbebebbbbbeeeeeeeeebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbeeebeebbee--: queryA 461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIM: 540 : * ** *** * ** ** * ** * ** * ** *** * *: 3qnf_A_1 429:-VENXXXXXXXXDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMM: 527 SecStr :- -------- HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHTT ----------------------------- HHHHH: ExpBur :-eee--------eeeebbbbbbbbbbbbebbeeeebeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebb: queryA 541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637 :* **** *** ** * * *** * * ** * * * * ** * *** * * : 3qnf_A_1 528:NTWTLQKGFPLITI-TVRGRNVHMKQEHYM----KXXXXXXXTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 621 SecStr :HHHHHS S EEEEE-EEETTEEEEEEEE ---- ------- EEEEEEESS S EEEEE SSE-EEEE SS S EEESGGG SSSEEEETTT: ExpBur :ebbbebbbbbbbbb-beeeeebebebeebe----e-------eeeebbbbbbbbbeeeeeeeebbbeeee-eebebeeebebbbbbbbbbbbbbbbbeee: queryA 638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734 : * * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 3qnf_A_1 622:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 717 SecStr :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG SHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHH----: ExpBur :ebeebbebbeeebeebeeebbbbbbbbbbbbbeeeebebeebbebbebbeebeebbbbebbbebbeebbeebeeeeeeeeeeebbebbbebbbebb----: queryA 735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMEN: 782 : * ** * * * * * : 3qnf_A_1 718:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKES: 763 SecStr :-HH S- SSTTHHHHHHHHHHHHTTTT TTHHHHHHHHHHHTT : ExpBur :-eebeeee-eeebbbeebbeebbebbeeeeeeebeeeeeeeeeeeeee: |