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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [889 aa] | M1 family aminopeptidase :AMP1_PLAFQ | |
2 | b | C 1 (A) | non-polymer(19N) | [(1R)-1-amino-5-carbamimidamidopentyl]phosphonic acid | 213Q(E) 353A 354M 355E 388H 389E 392H 410N(K) 411E 469S(E) 472F(Y) 477Y (identity: 66.7 %/28.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4k5l_A_1 identity=28.5% |
queryA 134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226 :* * *** * *** ** * * ** * * * * * * * * * * : 4k5l_A_1 48:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 139 SecStr :S EEEE SS EEEEEEETTEE BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT EEEEE--------TTEEEEE TTTTGGGTS B S: ExpBur :eeebebbbeebeeeebbbeeeebeeeebbebeeeebbbeeeebeeeebbbbbebbbebeebebbbbbbeb--------eebbbbbbbbebbbebbbbbbe: Contact : b queryA 227:PAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW-NVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAGHGDYALNV: 320 :* * * * * * * * * * * ** * * * * ** : 4k5l_A_1 140:PDMMAKYDVTVTADKEKYPV--LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQ--WALEC: 235 SecStr :TT EEEEEEEEEETTT E--EEESSEEEEEEEETTTEEEEEEEEEEEE GGG EEEE EEEEEEEEE SSS EEEEEEEEEGGGGGG H--HHHHH: ExpBur :bbbebebbbbbbbeeeebee--bbbbeeeeeeeeeeeebbbbebebeeebbbbbbbbbbbebeeeeeebebeeeeeebebebbbeeebeebbe--bbbbb: queryA 321:TGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYL: 420 : * * * *** ***** ** **** * * ** ** ** ** ** * * * ** * *: 4k5l_A_1 236:LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENL: 335 SecStr :HHHHHHHHHHHH SSEEEEEEESS SSSEE TTEEEEEGGGT TTTS THHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHH: ExpBur :beebbebbbebbebbbeeeebbbbbbbbbbebbbbbbbbbbbbbbbbbbebeebbbebbeebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbb: Contact : bbb bb b bb queryA 421:GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504 : * * * * * * *** * * ** * ** * * * * * : 4k5l_A_1 336:FSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 414 SecStr :HHHHHH HHHH----HHHHHHHHHHHHHHHHSTT SS -SEES GGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbeeebebebbb----bebbeebbbbbbbbbebebbbbbbb-eebebbebbebbbbebbbbbbbbbbbbbbeeeebeebbeebb: Contact : b b b |