#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | J 1 (G) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | K 1 (I) | polymer(polypeptide(L)) [75 aa] | Non-structural protein 7 :R1AB_SARS2 | 409T 411K 412P 413G 415F 420Y 429F 430K 431E 436E 440F 441F 442F 443A 444Q 445D 552N 843F (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7re3_J_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7re3_J_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : HHHHHHHHHTTS EEESSSSS B EEESSS EEE B S EEEEE TTS EEEEEEE B HHHHHHHHHHHHHTSS SSB EEEE: ExpBur :eeeebbeebbeebebebeeeeeeeeeeebebbebeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbbeeeeebeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7re3_J_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS SSS TTHHHHHHTTSS SSGGGSS SS TTT THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEE: ExpBur :ebeeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeebbbbbbebeebbebbeebbeebbebbeebbebbebbeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7re3_J_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBSSS B TT EE STT EE HHHHHHHTTHHHHTTTTGGGGBGGG TTS B TT HHHHHHHHHHHSTT S SSGGG S: ExpBur :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebe: queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7re3_J_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :SHHHHHHHHHHHHHHTTSS GGG EEEEE EETTEE EEEEEE SSS EEE S SEE HHHHHHHHHSHHHHHHHSEE S SS EEEESS: ExpBur :ebbbbbbbbbbbbbbbebbeeebbeebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeebeebebeebebebebbee: queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7re3_J_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B B EE HHHHHHHHTTT S TT S B B TBHHHHHHGGGGG HHHHHHHHHHHHHHT S TTT S SSS : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbebebeebeeeebeeeb: Contact : b bbb b b bbb b bbbbbb queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7re3_J_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHHTSS EEEEE BSSSS EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB S STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebb: Contact : b queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7re3_J_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSB EEE TTTTTS HHHHHHHHHHTTTT SSSS HHHHHHHHHHHHHHTTSSEEESSS EEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebeeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbb: queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7re3_J_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHHS STT SHHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHS EETTEE B BHHHHHHTSS HHHHHHHHHHHHSS GGG EEE: ExpBur :bbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeebbeebbbbebebbbbbbbbbbbbbbeeeebbee: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7re3_J_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr : TTS S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSSTTTSSTT SHHHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeee: Contact : b queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7re3_J_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SS TT GGGTTSTHHHHGGG TT : ExpBur :eeeeeeeeebeeebeeeebeebbeeee: |