#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | J 1 (G) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | G 1 (H) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 324T 325S 326F 327G 328P 329L 330V 331R 332K 338V 339P 340F 344T 368F 371L 374Y 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 405V 407F 508K 509W 514L 518S 523D 666M 675V (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7re3_J_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7re3_J_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : HHHHHHHHHTTS EEESSSSS B EEESSS EEE B S EEEEE TTS EEEEEEE B HHHHHHHHHHHHHTSS SSB EEEE: ExpBur :eeeebbeebbeebebebeeeeeeeeeeebebbebeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbbeeeeebeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7re3_J_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS SSS TTHHHHHHTTSS SSGGGSS SS TTT THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEE: ExpBur :ebeeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeebbbbbbebeebbebbeebbeebbebbeebbebbebbeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7re3_J_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBSSS B TT EE STT EE HHHHHHHTTHHHHTTTTGGGGBGGG TTS B TT HHHHHHHHHHHSTT S SSGGG S: ExpBur :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebe: Contact : bb b queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7re3_J_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :SHHHHHHHHHHHHHHTTSS GGG EEEEE EETTEE EEEEEE SSS EEE S SEE HHHHHHHHHSHHHHHHHSEE S SS EEEESS: ExpBur :ebbbbbbbbbbbbbbbebbeeebbeebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeebeebebeebebebebbee: Contact : bbbbbbbbb bbb b b b b bbbbbbb bbbbbbb b b b b queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7re3_J_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B B EE HHHHHHHHTTT S TT S B B TBHHHHHHGGGGG HHHHHHHHHHHHHHT S TTT S SSS : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbebebeebeeeebeeeb: Contact :b b b queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7re3_J_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHHTSS EEEEE BSSSS EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB S STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbebb: Contact : bb b b b queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7re3_J_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSB EEE TTTTTS HHHHHHHHHHTTTT SSSS HHHHHHHHHHHHHHTTSSEEESSS EEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebeeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbb: Contact : b b queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7re3_J_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHHS STT SHHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHS EETTEE B BHHHHHHTSS HHHHHHHHHHHHSS GGG EEE: ExpBur :bbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeebbeebbbbebebbbbbbbbbbbbbbeeeebbee: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7re3_J_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr : TTS S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSSTTTSSTT SHHHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeee: queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7re3_J_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SS TT GGGTTSTHHHHGGG TT : ExpBur :eeeeeeeeebeeebeeeebeebbeeee: |