#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [928 aa] | RNA-directed RNA polymerase :R1AB_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dte_A_1 identity=100.0% |
queryA 2:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 101 :****************************************************************************************************: 7dte_A_1 4:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 103 SecStr : HHHHHHHHHHTTS EEE SS SS S EEEEEESSS EEEEEE SEE EEE GGG EEEEEEEEE HHHHHHHHHHHHHHTT SSB E: ExpBur :eeeeebbeebbeeeebebeeeeeeeeeebeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebeb: queryA 102:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 201 :****************************************************************************************************: 7dte_A_1 104:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 203 SecStr :EEE SSSS EEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTS HHHHTSSSSS SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTE: ExpBur :bebeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbeebbebbebbeeebb: queryA 202:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 301 :****************************************************************************************************: 7dte_A_1 204:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 303 SecStr :EEE GGGBBSSS B SS EE STT EEE HHHHHHHTHHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG : ExpBur :ebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbeeb: queryA 302:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 401 :****************************************************************************************************: 7dte_A_1 304:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 403 SecStr :SSHHHHHHHHHHHHHHTTSS GGG B EEEEEBSS EEEEE EEEETTTEEEE S SSB HHHHHHHHHSSHHHHHHSB TT SS EEEES: ExpBur :eebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeeeeebebeebebebebbe: queryA 402:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 501 :****************************************************************************************************: 7dte_A_1 404:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 503 SecStr :SSS B EE HHHHHHHHHTT S TT SS B B TTHHHHHHGGGGG HHHHHHHHHHHHHHT S GGG TTS : ExpBur :eeeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeebebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebeeeeeeee: queryA 502:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 601 :****************************************************************************************************: 7dte_A_1 504:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 603 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHTTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHHH: ExpBur :bbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbeeebeeebbeeb: queryA 602:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 701 :****************************************************************************************************: 7dte_A_1 604:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 703 SecStr :HHHHTSS SSEEEEE TTHHHH HHHHHHHHHHHHTT SSSS HHHHHHHHHHHHHHHTS EEE SSEEEE SS TT TTHHHHHHHHHHHHHHH: ExpBur :beebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbb: queryA 702:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 801 :****************************************************************************************************: 7dte_A_1 704:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 803 SecStr :HHHHHHHTS TTS HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EE: ExpBur :bbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbe: queryA 802:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 901 :****************************************************************************************************: 7dte_A_1 804:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 903 SecStr :ES TTS S BTTBEEEEEE SSSEEEEEE HHHHHHHHHEESSGGGGSSTT HHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeebeeeeee: queryA 902:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :****************************: 7dte_A_1 904:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 931 SecStr :HSS S GGGTTSHHHHHHTTS : ExpBur :eeeeeeeeeebeeeeeeeebeebbeeee: |