#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | I 1 (A) | non-polymer(ZN) | ZINC ION | 487C 571F 642H 645C 646C (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8sq9_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8sq9_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHSTTS EE SS SSS EEEEEEEEEE SS EEEEEEEEEEEEEEEEE SSS EEEEEEEEEE HHHHHHHHHHHHHHTT TTB EE EE: ExpBur :eeebbeebbeeeebebeeebebeeebeeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbbbeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8sq9_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EEETTEEEEEEEEEEE SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS GGGGTSSSTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :beeeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebbebbbebbeebbebbebbbebbebbeebbbbb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8sq9_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B TT EE STT EE SHHHHHHHHHHHHTTTTGGGGBGGG TTS B TT HHHHHHHHHHH TT S SSGGG S: ExpBur :bbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeebeeeeeebbebbeebbeebbeebebebbbbbeebee: queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8sq9_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTTSS GGGSEEEEE EETTEE EEEEEEETTTEEEE S SBS HHHHHHHTTSHHHHHHHSEE TT SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbbeebbbebeeebebeeeebebbbbbbbebbbbbebeeeeeeeeebeeeeebbbebbbbebbeeeeebebeebebebebbeee: queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8sq9_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT S TT S B B S SHHHHHHHHTT HHHHHHHHHHHGGGGSS GGG S S SB : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebebbbbebeebebeeeeeebb: Contact : b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8sq9_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGT BHHHHHHHS HHHHHHHHHHTTSS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeebbebebbbbbbbbbbbebbbbebbeebeeeeebbbbbebebeebbbbebbe: Contact : b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8sq9_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTTT SSEEEEEEE TTHHHH HHHHHHHHHHHGGG TTT HHHHHHHHHHHHHHHTS EEE SSEEEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeebebbbbebebbbbbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbbebebeebbbbbbbbbbbbbbb: Contact : b bb queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8sq9_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS SSS HHHHHHHHHHHHHHHT SS HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTT EEES: ExpBur :bbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbebbbebbeebbbbbbebebbbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeee: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8sq9_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : TTS S BTTBEEEEEESSS EEEEEE HHHHHHHHHEESSSGGG TTT SHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeebeebeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8sq9_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr : SGGGGGGSSHHHHGGGSS : ExpBur :eeeeeeeebeebbeeebbeebbeeee: |