#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [860 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | I 1 (A) | non-polymer(POP) | PYROPHOSPHATE 2- | 73K 218D (identity: 100.0 %/93.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7thm_A_1 identity=93.2% |
queryA 6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR: 105 :********************************************* ******* **************************************** : 7thm_A_1 6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKXXXCRFQEKDXXXNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKXX: 105 SecStr : HHHHHSSSS EEE SBTTB EEEEEEESSS EEEEEEE --- EEEE --- EEEEE EEE HHHHHHHHHHHHHHTTSTTS EEE --: ExpBur :ebeeebbeebeeebeeeeeeeeeeeeebbbbeeeeebbbbbbbee---bbbbbee---eeebbbbbbbeeeeeebeebeebbeebeebebbbebebbe--: Contact : b queryA 106:IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205 : ***********************************************************************************************: 7thm_A_1 106:XXXXXVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205 SecStr :----- EEE SB SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSS S SSS THHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT BEE : ExpBur :-----ebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebebbbebeebbebbeebbeebbebbbebbebbbbbeebbbebbb: queryA 206:TLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR: 305 :******************* ******************************** ********************************************: 7thm_A_1 206:TLDNQDLNGNWYDFGDFIQXXPGSGVPVVDSYYSLLMPILTLTRALTAESHVDXXXTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDR: 305 SecStr : GGGSBSSS TT B -- EE HHHHHHHTHHHHHTTTTSGGGB --- B TT HHHHHHHHHHH TT S SSGGG SSHH: ExpBur :bbbbbbbebbbbebbebee--eeebebebbbbbbbbbbbbbbbebbebbbeee---eeeeeebeeeeeebbeebeebbeebbebbeeebbbbbeebeebb: Contact : b queryA 306:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV: 405 :********************************************************** **************************************: 7thm_A_1 306:CILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSXXXXFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNV: 405 SecStr :HHHHHHHHHHHHTTSS TTTSB EE EETTEE EE EEE SSS EEE SS S ---- HHHHHHHH HHHHHHTSB SS S EEEESSSS : ExpBur :bbbbbbbbbbbbbebbeeebbbbbeeebeeeeeeeebbbbbbbebbbbbebeeeeeee----eeeebbeebbbbebeeeeeebebeebebebebbeeeee: queryA 406:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP: 505 :****************************************************************************************************: 7thm_A_1 406:AFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFP: 505 SecStr : B B B HHHHHHHHHTT S TT S B B SBTHHHHHGGGGG HHHHHHHHHHHHHHGGG TTT S HH: ExpBur :eeeebeeeeeeeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebbbeeeebeeeeeeeebbbb: queryA 506:FNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV: 605 :************** **********************************************************************************: 7thm_A_1 506:FNKWGKARLYYDSMXXXXQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTV: 605 SecStr :HHTT HHHHHTT ---- HHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHH: ExpBur :beeeeebeebbeee----eeebbebbbebbbbbbbebebeeeebeeeebebebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbeeb: queryA 606:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN: 705 :****************************************************************************************************: 7thm_A_1 606:YSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVN: 705 SecStr :TS SS B TTHHHHS HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHHTS EEE SSEEEE S TTSTTHHHHHHHHHHHHHHHHHHH: ExpBur :eeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbebbebebbbbbbbbbbbbbbbbbb: queryA 706:ALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL: 805 :********* *****************************************************************************************: 7thm_A_1 706:ALLSTDGNKXXDKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDL: 805 SecStr :HHHHS TT -- HHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEEEEE HHHHHHTSS HHHHHHHHHHHHS GGG T: ExpBur :bbbbebbee--eeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeeeeb: queryA 806:TKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSV: 905 :***************** ********************** ************************************* : 7thm_A_1 806:TKGPHEFCSQHTMLVKQXXXYVYLPYPDPSRILGAGCFVDDIXXXXXXXMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXX: 905 SecStr :TS S SSS EEEEE --- EEEEE HHHHHHHHHB ------- THHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHH --------------: ExpBur :eebbeebeebbbbebee---ebbbbbbebbebbbbbbbeeee-------eeeebeebbbbbbbbeebeeeebbebbebbbebbeee--------------: queryA 906:MLTNDNTSRYWEPEFYEAMYTPH: 928 : ************: 7thm_A_1 906:XXXXXXXXXXXEPEFYEAMYTPH: 928 SecStr :----------- HHHHHHTTS : ExpBur :-----------eeeebeebbeee: |