#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [908 aa] | RNA-directed RNA polymeras :R1AB_SARS2 | |
2 | b | H 1 (A) | non-polymer(ZN) | ZINC ION | 487C 642H 645C 646C (identity: 100.0 %/98.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dfh_A_1 identity=98.2% |
queryA 5:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF: 104 :****************************************************************************************************: 7dfh_A_1 6:QSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKF: 105 SecStr : HHHHHHHTTS EEEESSSTTS EEEEEEEEEESSS EEEEEEEEEEEEEEEEE TT EEEEEEEEE HHHHHHHHHHHTTTTTSTTB EEEEEE: ExpBur :eebeeebbeeeebebeeeeeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeebbeebeebbeebeebebbbebebbee: queryA 105:RIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV: 204 :*** ***********************************************************************************************: 7dfh_A_1 106:RIDXXMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV: 205 SecStr : -- EEEEEE SB SSBHHHHHHHHHS TT HHHHHHHHHTTSS GGGGGSSS S TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEEEE: ExpBur :eee--eebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbbebbebbebbeebbbebb: queryA 205:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 304 :****************************************************************************************************: 7dfh_A_1 206:LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 305 SecStr : GGGBBTTS B SS EE STT EE HHHHHHHHHHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG SSH: ExpBur :bbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebebbbeebeeb: queryA 305:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 404 :****************************************************************************************************: 7dfh_A_1 306:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 405 SecStr :HHHHHHHHHHHHHTTTS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S SEES HHHHHHHHH HHHHHHHSB TT SS EEEESSSS: ExpBur :bbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebeebbbebbbbeeeeeeeebebeebebebebbeeee: queryA 405:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 504 :****************************************************************************************************: 7dfh_A_1 406:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 505 SecStr : B EE HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG HHHHHHHHHHHHHTT S GGG S SSSB B: ExpBur :eeeeebeeeeebeebeebbeeeebbeeeeebebebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebbbebeebeeeebeeebbb: Contact : b queryA 505:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 604 :****************************************************************************************************: 7dfh_A_1 506:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 605 SecStr :TGGGT BHHHHHHHS HHHHHHHHHHHTTS B EEEE BSSS EEEE HHHHHHHHHHHHHHHHHHHH SSSB TT STTTHHHHHHHH: ExpBur :bbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeeeebebebbbbbbbbbebbbbebbebbbeeeebbbbbeeebeebbbeebbee: queryA 605:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 704 :****************************************************************************************************: 7dfh_A_1 606:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 705 SecStr :HSSS SSEEEEEE TTTTTS HHHHHHHHHHHHTT TTT HHHHHHHHHHHHHHTTS EEESSSEEEE S TT TTHHHHHHHHHHHHHHHHHH: ExpBur :bbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbeebebbebbbbbbbbbbbbbbbb: Contact : b bb queryA 705:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 804 :****************************************************************************************************: 7dfh_A_1 706:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 805 SecStr :HHHHTS SSS S SHHHHHHHHHHHHHHT SS TTHHHHHHHHHHHHEEEEE SS EEEEEEHHHHHTTSS HHHHHHHHHHHHS TTTSEEE : ExpBur :bbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbeeee: queryA 805:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYS: 904 :******************************************************************************************* : 7dfh_A_1 806:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXX: 905 SecStr :SSS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGGSHHHHHHHHHHHHHHTGGGTTSSSHHHHHHHHHHHHHHHHHHHH ---------: ExpBur :eeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebeeee---------: queryA 905:VMLTNDNTSRYWEPEFYEAMYTPHT: 929 : *******************: 7dfh_A_1 906:XXXXXXNTSRYWEPEFYEAMYTPHT: 930 SecStr :------ TTSTTSTHHHHTTSSS : ExpBur :------eeeeeeeeeebeebbeeee: |