#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [929 aa] | RNA-directed RNA polymerase nsp12 :R1AB_SARS2 | |
2 | b | E 1 (G) | polymer(polypeptide(L)) [113 aa] | Non-structural protein 9 :R1AB_SARS2 | 36D 37I 38Y 39N 202V 204V 206T 221D 223I 225T 226T 231V 232P 291D 728Y 733R 735R (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8sqk_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 8sqk_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : HHHHHHHHHHTTS EEESS SSS EEEEEEEESSS EEEEEEEE S EEEEEEETTTEEEEEEEEEEE HHHHHHHHHHHHHHTTSTTB EE: ExpBur :eeeeeebbeebeeeeebebeeebebeeebebebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeebbbbbbbebeeeebeebeebbeebeebebbbebb: Contact : bbbb queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 8sqk_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEEETTEEEEEEEEEEE SSBHHHHHHHHHS TT HHHHHHHHHTTSS TTGGGSS SS TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebebeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 8sqk_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBSS B SS EE STT EEE SHHHHHHHHHHHHTTTTGGGSBGGG TTS B TT HHHHHHHHHHHSTT S SSGGG: ExpBur :bebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebeebbeebbeebbebbebebbbbbee: Contact : b b b b b bb bb b queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 8sqk_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SHHHHHHHHHHHHHHGGGS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHHSSHHHHHTSEE TT S EEEE: ExpBur :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbeebeeeeebebeebebebebb: queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 8sqk_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B EE HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG HHHHHHHHHHHTTSS S TTS S SSS: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebebebbbebbbebebbeebbbbbbbbbbbbbbbebbbeebebbebebeebebeeeee: queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 8sqk_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : TTGGGT HHHHHHSS HHHHHHHHHHTTSS EEEEEE BSSS EEEE HHHHHHHHHHHHHHHHHHTS SSSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbe: queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 8sqk_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEE TTHHHH HHHHHHHHHHHGGG TTT HHHHHHHHHHHHHHTTS EEESSSEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbeebebbebbbbbbbbbbbb: queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 8sqk_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS SSS SSHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS HHHHHHHHHHSSS TTS E: ExpBur :bbbbbbbbbbebeebeeeebeebbbebbbbbbeeeeebeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbeeebbbbbbbbbbbbbbeeeebb: Contact : b b b queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 8sqk_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EES TTS S BTTBEEEEEE SSSEEEEEE HHHHHHHHHEESSGGGG GGG SHHHHHHHHHHGGGGG SSTTTHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeeeeebbeebeeeebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :*****************************: 8sqk_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :HHSS GGGTTSTHHHHGGGSTT : ExpBur :eeeeeeeeeeeeeeebeeebbeebbeeee: |