#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 414N 417K 847I 848V 850T 851D 853T 854L 898H 899M 903Y 906M 908T (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwn_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gwn_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHS SS B SS SSS EE SSS EE B GGG S B SHHHHHHHHHHHHHTT SSS B: ExpBur :eeebbeebbeeeeebbeeebeeeeeeeeebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbbeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gwn_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr : SSSS BB S SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGTSS SS SSS TTHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :eeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebeebbeebbeebbebbbebbebbeebeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gwn_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E TTSSBSSS S EE TT EEE SHHHHHHTTHHHHS TTGGGSBTTS TTS B TT SSHHHHHHHHS SS SSGGG SS: ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebeebbeebbeebbebbeeebbbebeebee: queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gwn_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :SHHHHHHHHHHHHTTTSS SSS EE EEEETTEEEE EEE SSS EEE S S S SHHHHHHHS HHHHHHSS SS SS SS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbeebbbbeeeeeeeeeebeebebebebbeee: queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gwn_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT TT S B B STTHHHHHGGGGG STTHHHHHHHHHHHTTS TTT S S S : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebebebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeeeeeebb: Contact : b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gwn_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :GGGTTT HHHHHHSS HHHHHHHHTTTTSS B EE BS S EE B HHHHHHHHHHHHHHHHHHTT SSSB TT STTTTHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebeeeeebbeeeebbbebebbbbbbbbbebbbbebbebbeeeeeebbbbeeebeeebbeebbe: queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gwn_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SS SSTTTS HHHHHHHHHHHT S SSSS SHHHHHHHHHHHHHHSS SSS SS TTSSSHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbeebeeebeeeeebbbbbbbbbbbbebbbbbebbbbbbebbbbeebbbeebbbbbbbbbbbbbbb: queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gwn_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHSS TTT SSHHHHHHHHHHHHTS SS HHHHHHHHHHHHHS EESSS EE STTTTSSSS SHHHHHHHHHHH TTS S: ExpBur :bbbbbebebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gwn_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S SSS B EETTEE B HHHHHHHHHEESSTTTS SGGGHHHHHHHHHHT TTTT SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeeeeee: Contact : bb bb bb bb b queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8gwn_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :S S TTTTSHHHHTGGGSS : ExpBur :eeeeeeeebeeebeeeebeebbeeee: Contact : b b |