#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 414N 415F 417K 846D 847I 848V 851D 853T 854L 895L 898H 899M 902M 903Y 907L (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwb_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gwb_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHS SS EEESSSSSS EEEEE EETTEES EEEEE S EEEEEEETTTEEEEEEEEEEE HHHHHHHHHHHHHHTT TTS EEEEEE: ExpBur :eeebeeebbeeebeebeeeeeeeebbebebbbbeeeeebbbbbbbeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gwb_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTS HHHHHSTTSS SSS THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :beeeeeebbbbbbbebbebbbbbbbbbbbbbebeebebbbebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbbebbebbebbeebbbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gwb_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B TT EE STT EE SHHHHHHHHHHHHTTGGGGGSSTTS TTS TT HHHHHHHHHHH TT S SSGGG SS: ExpBur :ebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeebeeeeeebbebbeebbeebbebbebebbbbbeebee: queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gwb_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHHTTS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE SS SEES SHHHHHHHH HHHHHHTSEE TT SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbbbeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbbbbbbbebeeebeebebeebebebbbbeee: queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gwb_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT S TT S B B GGGHHHHHGGGGG HHHHHHHHHHHHHHT S GGG S TTS : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeebebebebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbebebeebebeeeeeebb: Contact : bb b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gwb_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :BTGGGT HHHHHHSS HHHHHHHHHHTTTS EEEEEE BS S EEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeebebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebbbebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebeeeebbbbebbe: queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gwb_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SSEEEE TTHHHH HHHHHHHHHHHTTT SSSS HHHHHHHHHHHHHHHTS EE TTEEEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbb: queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gwb_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS TTS HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEESSS EEEEEEHHHHHTTSS SHHHHHHHHHHTSS GGG EE : ExpBur :bbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbebbbebbeebbbbbbeeeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbeee: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gwb_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSTTT HHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :ebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeebeebbeebebbbebbbebbbbeebeeeebbebbebbbebbebbbeeeeeeeeeee: Contact : bbb b bb b bb bb queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8gwb_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SS TTTTSHHHHHGGGSS : ExpBur :eeeeeeeeeeeebeeeebeebbeeee: Contact : b |