#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [185 aa] | Non-structural protein 8 :R1AB_SARS2 | 414N 415F 417K 421D 846D 847I 848V 851D 853T 854L 895L 898H 899M 902M 903Y 907L 908T 909N (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7rdx_A_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7rdx_A_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : TTHHHHHHH SS EEESSSSS EEE EEESSS EEE EEE S EEEEE TTS EEEEEEE B HHHHHHHHHHHHHHTT SSB EEEE: ExpBur :eeeebbeebbeebebebeeebeeeeebebebbebebeeebbbbbbbebeebbbbbbbeeeeeeebbbbbbbbeeeebbeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7rdx_A_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS TTHHHHHHTTSS SSGGGSTTSS SSS THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEE: ExpBur :ebebeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeebbbbbbebeebbebbbebbbebbebbbebbebbebbeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7rdx_A_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBTTS B TT EE STT EEE HHHHTTTTTHHHHTTTTGGGGBGGG TTS B TT HHHHHHHHHHHSTT S SSGGG S: ExpBur :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeebeeeeeebbeebeebbeebbebbebebbbbbeebe: queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7rdx_A_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :SHHHHHHHHHHHHHHGGGS GGG B EEEEEETTEEEEEE EEEETTTEEEE S SEES HHHHHHHHHSHHHHHHHSEE TT SS EEEESS: ExpBur :ebbbbbbbbbbbbbbbebbbeebbbbbeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbebbeeeeebebeebebebebbee: queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7rdx_A_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B B EE HHHHHHHHHTT S TT SS B B TBHHHHHHGGGGG HHHHHHHHHHHHHHT S TTT S TTS : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeebebbbebbbbbebbbebbbbbbbbbbbbbbbbbbbeebebbbbebeebebeeeeeeb: Contact : bb b b queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7rdx_A_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : TTGGGT HHHHHHHS SHHHHHHHHHHTTS EEEEE BSS S EEEE HHHHHHHHHHHHHHHHHHTT SSSSB S STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbbebb: queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7rdx_A_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSEEEEE TTHHHH HHHHHHHHHHTTSS SSSS HHHHHHHHHHHHHHTTS EEESSS EEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebbeebeebebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebbbebbbbbbbbbbbbbbb: queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7rdx_A_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHHS SSS HHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHH EEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EEE: ExpBur :bbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbebbbebbeebbbbbbebeebbbbbbeebbeebbbbebebbbbbbbbbbbbbbeeeebbee: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7rdx_A_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr :S GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSSSSSSSTT SHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeeebbeebbebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeeeee: Contact : bbb b bb b bb b queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7rdx_A_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SSS SS GGGTTSHHHHHGGGSTT : ExpBur :eeeeeeeeebeebbeeeebeebbeeee: Contact :b bbb |