#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [914 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [104 aa] | Non-structural protein 8 :R1AB_SARS2 | 415F 416N 421D (identity: 100.0 %/98.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bzf_A_1 identity=98.4% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 7bzf_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : HHHHHHHHHHHTTS S EE S SS S EEEE SS EEEE S EEEEEEGGGEEEEEEEEB HHHHHHHHHHHTTTSSSSS : ExpBur :eeeeeebbeebbeebeeebbeeeeeebeeeeebbebeeeeebbbbbbbebeebbbbbbeeeeeeeebbbbbbbebeeeebeebeebbeebeebebbbebe: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 7bzf_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr : EEEBTTSS EEE B S SS HHHHHHHHHS TTT TTTTTTTTTTSS GGGTTSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT: ExpBur :bbeeebeeeebebbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebeebbeebbeebbebbbbbbebbeebeebb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 7bzf_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGB TTS B TTS EE STT EE HHHHHHHGGGTTTTTTTSSTTBSSSSSSS B TT HHHHHHHHHHH TT SS SSSTT: ExpBur :bebbbbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbebebbbbbee: queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 7bzf_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHTSSS TTS EEEEEEEEETTEEEEEEEEEE SSS EE SS S BS HHHHHHHHHSSHHHHSSSEE SS S EEEE: ExpBur :beebbbbbbbbbbbbbbbebbbeebbeebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeeeeebbbebbbbebeeeeeebebeebebebbbb: queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 7bzf_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr : SSS B B HHHHHHHHTT S TT S B B STTHHHHHGGGGG HHHHHHHHHHHHHHTTT STT S TTS: ExpBur :eeeeeeeeebeeebeebebeebbeeeebbeeeeebebebebeeeebebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbbbebeebeeeeeee: Contact : bb b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 7bzf_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeebbeebbebbbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbbbbbbebbebbeeeeeebbbbeeeebebbbee: queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 7bzf_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHTSS SSEEEEE TTHHHH HHHHHHHHHHHHTT SSS HHHHHHHHHHHHHHHTS EEE SSEEEE SS TT TTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbb: queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 7bzf_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHSSS GGG SSHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEE EETTEEEEEEEHHHHHHTSS HHHHHHHHHHHTS TTS : ExpBur :bbbbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :************************************************************************************************ : 7bzf_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXX: 900 SecStr : B SSS S BTTBEEEEEESSS EEEEEE HHHHHHHHH BSSTT TTSSTHHHHHHHHSSS GGGGSSSHHHHHHHHHHHHHHHHHHHHH ----: ExpBur :ebeeeeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeebeeebbeebbebbeebbbbeeeeeeeebebbebbbebbeebeeeee----: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 : ******************: 7bzf_A_1 901:XXXXXXXXXXXTSRYWEPEFYEAMYTPHT: 929 SecStr :----------- TTSSTTTTGGGS : ExpBur :-----------eeeebeeebbeebbeeee: |