#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [853 aa] | nsp12 :R1AB_SARS2 | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [186 aa] | nsp8 :R1AB_SARS2 | 415F 417K 847I 848V 851D 852G 853T 854L 898H 899M 902M 903Y 906M 907L 908T (identity: 100.0 %/94.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6yyt_A_1 identity=94.9% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130 :******************** ********************* *************: 6yyt_A_1 34:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXFSNYQHEETIYNLLKDCPAVAXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 133 SecStr : EEEEEEESSS EEEEEEE -------------------------- HHHHHHHHHHHHTSS TTB -------------------- SSBHHHHHHH: ExpBur :eeebbbeeeeebbbbbebee--------------------------eeeeeeeeebeeebeebebbe--------------------eebebbbbbbbbb: queryA 131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230 :****************************************************************************************************: 6yyt_A_1 134:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 233 SecStr :HHS SS HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEEE GGGBBSSS B S EE STT : ExpBur :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbbbbebbebbeebbbebbbbbbbbbbebbbebbeebeeeeeeeb: queryA 231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330 :****************************************************************************************************: 6yyt_A_1 234:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 333 SecStr : EE HHHHHHHHHHHHHHTGGGGGGBTTS SSS B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHHTTTS TTT EEEE: ExpBur :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebe: queryA 331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430 :****************************************************************************************************: 6yyt_A_1 334:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 433 SecStr :EEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHH HHHHHHHSEE SSSSS EEEESSSS HHHHHHHHHTT S : ExpBur :eebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbbbbbbbebeeeeeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebee: Contact : b b queryA 431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530 :****************************************************************************************************: 6yyt_A_1 434:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 533 SecStr :TT S B GGGHHHHHGGGGG HHHHHHHHHHHHGGGSSS GGG S SSSB TTGGGT BHHHHHHHS HHHHHHHHHH: ExpBur :eebebebebebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbeb: queryA 531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630 :****************************************************************************************************: 6yyt_A_1 534:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 633 SecStr :HTTS EEEEEE BSSSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTSS SSEEEEE TTHHHH HHH: ExpBur :bbebbbbbbbbbebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebbebbbeebbeebbeebeeeebbbbebeebebbbbbbb: queryA 631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730 :****************************************************************************************************: 6yyt_A_1 634:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 733 SecStr :HHHHHHHHHTT SSSS HHHHHHHHHHHHHHTTS EEEETTEEEE S SSSTTSHHHHHHHHHHHHHHHHHHHHHTS SSS HHHHHHHHHHHHH: ExpBur :bbbbbbbbbebbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb: queryA 731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830 :****************************************************************************************************: 6yyt_A_1 734:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 833 SecStr :HHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHTT TTS EEES TTT S SSS EEEEEESSS EEEEE: ExpBur :bbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebbbbebebeeeebbbb: queryA 831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************************************************************************************: 6yyt_A_1 834:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 932 SecStr :E HHHHHHHHH SSSHHHHSS HHHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS STTGGGGGGGSHHHHHGGG TT : ExpBur :bbebbebbbbbbbbeeeeebeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebbeebbeeeeeeeeeeeeeeebeeebeeeebeebbeeee: Contact : bb bbbb bb bb bbb |