#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [931 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [76 aa] | Non-structural protein 7 :R1A_SARS2 | 409T 412P 413G 415F 420Y 429F 431E 440F 441F 442F 443A 444Q 445D 552N (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwk_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 8gwk_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : SSHHHHHHHHTTS EEESSSSSS EEEEEEEESSS EEEEEEEE S EEEEEE GGG EEEEEEEE SHHHHHHHHHHHHHTT TTB EE: ExpBur :eeeeeebbeebbeeeeeebeeeeeeeeeeeeebbebeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebe: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 8gwk_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSSTT SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbeebeeeb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 8gwk_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBTTS B TT EE TT EEE HHHHHHHTTHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHH TT S SSGGG: ExpBur :bebebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbee: queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 8gwk_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHTTSS TTS EEEEE EETTEE EEEEEEETTTEEEE S SSBS HHHHHHHHH SHHHHTTSEE S SS EEEE: ExpBur :beebebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbeebbbbeeeeeeeeeebeebebebebb: queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 8gwk_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B B EE HHHHHHHHTTT S TT S B B TBHHHHHHGGGGG HHHHHHHHHHHHHTT S TTS S S S: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebeeeebebeeebebeeeeeebebebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeee: Contact : b bb b b b b bbbbbb queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 8gwk_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : SSGGGT HHHHHHHS HHHHHHHHHHTTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHTT SSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebebeeebeeeeebebebbbbbbbbbbbebbbbebbebbeeeeeebbbbeeeeebbbbee: Contact : b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 8gwk_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EEEETTEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbebbbbbebbbbebebbbbeebebbebbbbbbbbbbbb: queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 8gwk_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS TTS HHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHHHS TTS E: ExpBur :bbbbbbbbebbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 8gwk_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EES TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGGSGGGT HHHHHHHHHTGGGGG SSHHHHHHHHHHHHHHHHHHHHHHTTTT: ExpBur :eeeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbebeeeeeeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 :*******************************: 8gwk_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 SecStr :TTS SGGGGGSSHHHHGGGSSS : ExpBur :eeeeeeeeeeeeeeebeeeebeebbeeeeee: |