#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [75 aa] | Non-structural protein 7 :R1AB_SARS2 | 409T 411K 412P 413G 414N 415F 420Y 429F 431E 437L 440F 441F 442F 443A 444Q 445D 552N 843F (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7krn_A_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7krn_A_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : TTHHHHHHH SS EEEESSSSSS EEE EEESSS EEE EEE EEEE GGG EEEEEE B HHHHHHHHHHHHHS SSSSS EEEE: ExpBur :eeeebbeebbeeeebebeeeeeeeeebebebbebeeeeebbbbbbbebeebbbbbbeeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7krn_A_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEE SSSEEEEEEE SB SSBHHHHHHHHHS TTS STTHHHHHHTTSS SSGGGSTTSS SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEE: ExpBur :ebebeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbeebeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7krn_A_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBTTS B SS EE STT EEE TTTTTTSTTHHHHTTTTSTTSBGGG TTS B TT HHHHHHHHHHSSTT SS SSGGG : ExpBur :bbbbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebeeebebbbeebe: queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7krn_A_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :STTHHHHHHHHHHHHTTSS GGG S EEEEEETTEEEEEE EEE SSS EEE S TTB HHHHHHHHHSHHHHHHTSB SS SS BBSS: ExpBur :ebbbbbbbbbbbbbbbebbeeebbbbbeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbbebbbbebeeeeeebebeebebebebbee: queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7krn_A_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B B HHHHHHHHHTT S TT SS B B SBTHHHHGGGGGG HHHHHHHHHHHHHHT S GGG S S : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbebebeebebeeeeeeb: Contact : b bbbbb b b b b bbbbbb queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7krn_A_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr :TTTTTTT HHHHHHHS HHHHHHHHHHHTSS EEEEEE S BSSSS EEEEE HHHHHHHHHHHHHHHHHGGG SSSB S STTTTHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbbebb: Contact : b queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7krn_A_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSEEEEE TTHHHH HHHHHHHHHHTTSS SSSS SHHHHHHHHHHHHHTTS EEE SSSEEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbb: queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7krn_A_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHTS STT TTHHHHHHHHHHHHTS S HHHHHHHHHHHHHHS EEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHTS S TTS EEE: ExpBur :bbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbeebbebbeebbbbbbbbeebbbbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbeb: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7krn_A_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr :S STT S BTTBEEEEEEETTEEEEEEE TTHHHHHHH SSTTGGGSTT STTHHHHHHHHGGGTTSSSSTTHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebebbbebbbebbbbeebeeeeebebbebbbebbeebbeebeeeeeee: Contact : b queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7krn_A_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SSS SS SSTTSHHHHHGGGSTT : ExpBur :eeeeeeeeebeebbeeebbeebbeeee: |