#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [929 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [188 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 274D 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 375A 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 405V 407F 447N 509W 514L 515Y 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7uoe_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 7uoe_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : HHHHHHHHHHHTTS EEESSSTTS EEEEEEEEEESSS EEEEEEEEEEEE EEEE TTS EEEEEEEEEE HHHHHHHHHHHHHHTT TTB EE: ExpBur :eeeeeebbeebbeebebebeeeeeeeeeeebebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbebeeeebeebeebbeebeebebbbebb: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 7uoe_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSTTTT TTT THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 7uoe_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBTT B TT EE TT EE HHHHHHHHHHHHHTTGGGGGGBGGG SSS B TT HHHHHHHHHHHSSS S SSGGG: ExpBur :bebebbbbbbbbebbbbbbbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbee: Contact : bbbbb queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 7uoe_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHHSHHHHHHHSEE TT SS EEEE: ExpBur :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeebbbbbbbbebbbbbebeeeeeeeeebeebeebbbebbbbebeeeeeebebeebebebebb: Contact : bb b bbbbb bbbb b b bb b bbbbbbb bbbbbbb b b b queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 7uoe_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B B EE HHHHHHHHHTT S TT S B B SBTHHHHHGGGGG HHHHHHHHHHHHHTTSS GGG S SSS: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbbbebeebeeeeeee: Contact : bb b b b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 7uoe_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr :B BTGGGT BHHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbebebeebbbee: Contact : b bb b b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 7uoe_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEEE TTHHHH HHHHHHHHHHHHTT TTT HHHHHHHHHHHHHHHTS EEESSSEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebbebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbbebebeebbbbbbbbbbbb: Contact : b queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 7uoe_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS GGG HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTSEE: ExpBur :bbbbbbbbbbbbeebeeeebeebbbebbbbbbeeeeeeeebbeebbebbeebbbbbbebbebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 7uoe_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EES GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGG TTT SHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebebbbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :*****************************: 7uoe_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :HHSS TTGGGGGSHHHHHGGGSTT : ExpBur :eeeeeeeeeeebeeebeeeebeebbeeee: |