#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [929 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 274D 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 368F 371L 379A 380M 381H 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 405V 407F 509W 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7uob_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 7uob_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : HHHHHHHHHHHTTS EEESSSSSS EEEEEEEEEESSS EEEEEEEEEEEEEEEEE TTS EEEEEEEEEE HHHHHHHHHHHHHHTT TTB EE: ExpBur :eeeeeebbeebbbeeebebeeeeebeeeeeeebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebb: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 7uob_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSTTSS TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeebbbbbeebeebbebbeebbeebbebbeebbebbebbeeeb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 7uob_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBTT B TT EE TT EEE HHHHHHHHHHHHHTTGGGGGGBGGG TTS B TT HHHHHHHHHHHSSS S SSGGG: ExpBur :bebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbebeebeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbee: Contact : bb bb queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 7uob_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE S SSB HHHHHHHHH HHHHHHTSEE TT SSEEEEE: ExpBur :beebebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebeebbbebbbbeeeeeeeebebeebebebebb: Contact : b b bbbbb bbb b b b bbb b bbbbbbb b b queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 7uob_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B B EE HHHHHHHHHTT S TT S B B TBHHHHHHHGGGG HHHHHHHHHHHGGGGSS TTS S SSS: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeebebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebebbebebeebeeeeeee: Contact : bb b b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 7uob_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr :B TTGGGT BHHHHHHHS HHHHHHHHHHTTTS EEEEEE BSS EEEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebeeeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbee: Contact : b b b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 7uob_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEEEE TTHHHH HHHHHHHHHHHGGG TTT HHHHHHHHHHHHHHHTS EEESSSEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbb: Contact : b queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 7uob_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS GGG HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTSEE: ExpBur :bbbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbbeebeeebbbeeebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 7uob_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EES GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGG GGG HHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeebbebbebbebbbebbbebbbbeeeeeeeebebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :*****************************: 7uob_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :HHSSS TTGGGGGSHHHHHGGGSTT : ExpBur :eeeeeeeeeeeeeeebeeeebeebbeeee: |