#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [190 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 324T 326F 327G 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 396F 398V 400A 402T 403N 405V 407F 505P 508K 509W 514L 515Y 517D 518S 519M 523D 666M 675V (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7uo9_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 7uo9_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHH SS EEESSSSSS EEE EE SS EES EEE EE EEEEETTTEEEEEEEEEEE SSHHHHHHHHHHHHTTSTTB EEEEE: ExpBur :eeebbeebbbeeebebeeeeeeeeebeeebbbbbeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbbbeeeebeebeebbeebeebebbbebbbbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 7uo9_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EE SSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSTTTT TTT THHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE: ExpBur :beeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebbebbbebbbebbebbeebbebbbbbeebbbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 7uo9_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B SS EE STT EE HHHHHHHHHHHHHTTGGGGGGBTTS TTS B SS HHHHHHHHHHH TT S SSTTS S: ExpBur :bbbbbbbbbebebbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeebeeeeeebbeebeebbeebbebbebebbbbbeebee: Contact : bb b queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 7uo9_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTTSS TTSSS EEEEEETTEEEEEE EEETTTEEE SS SB HHHHHHHHHSHHHHHHHSEE SS SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbbeebbbbbeeebebeeeebebbbbbbbebbbbbebeeeeeeeeebeebeebbbebbbbebbeeeeebebeebebebebbeee: Contact : b bbbbbbb bbbb b b bb bb bbbbbbb bbbb bb b b b bb queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 7uo9_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B B EE HHHHHHHHHTT S TT S B B TBHHHHHHHGGGG HHHHHHHHHHHHHHTTT TTS S S SB : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebebbbbebeebebeeeeeebb: Contact : b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 7uo9_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGT BHHHHHHSS HHHHHHHHHHHTTS EEEE BSSS EE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeebbebebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbe: Contact : b bb bb bbb b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 7uo9_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHHTT SSEEEEEEE TTHHHH HHHHHHHHHHHGGG TTT HHHHHHHHHHHHHHHTS EEESSSSEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbbbebbbbbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbbebbbebbbbbbbbbbbbbbbb: Contact : b b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 7uo9_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHSS STT HHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTT EEES: ExpBur :bbbbbbbbbeebeeeebeebbbebbbbbbeeeeeeeebbeebbebbeebbbbbbebebbbbbbbbebbeeebbbbeebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 7uo9_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSSGGG GGG SHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeeeebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbeebbebbbebbbbeebeeebbbebbebbbebbeebbeeeeeebeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 7uo9_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr : GGGTTTTSTHHHHTTSSTT : ExpBur :eeeeeeeebeebbeeebbeebbeeee: |