#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 269D 270L 271L 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 374Y 375A 378P 379A 380M 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 447N 508K 509W 514L 515Y 517D 518S 523D 666M 675V (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7krp_A_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7krp_A_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : TTHHHHHHHTTS EEEESSSSS EEE EEESSS EEE EEE S EEEEE GGG EEEEEEE B HHHHHHHHHHHHHSTT SSS B EE: ExpBur :eeeebbeebbeeeebebeeeeeeeeebebebbbbeeeeebbbbbbbebeebbbbbbeeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7krp_A_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEE SSSEEEEE EEEE SSBHHHHHHHHHS TTS TTHHHHHHTTSS SSGGGSTTSS SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHTTTEE: ExpBur :ebebeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbeebbeebbebbeebbebbebbeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7krp_A_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBTTS B TT EE STT EEE HHHHHHHTTHHHHTTTTGGGSBGGG SSS B TT HHHHHHHHHHHSSS S SSGGG S: ExpBur :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebeeebbbbbeebe: Contact : bbb b queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7krp_A_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :STTHHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHHSHHHHHHTSEE TT SS EEEESS: ExpBur :ebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebeebbbebbbbebeeeeeebebeebebebebbee: Contact : bbbb bbbbb bbbb b b b bb bbb bbb bbbbbbb b b b b queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7krp_A_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B EE HHHHHHHHHTT S TT SS B B TTHHHHHHGGGGG HHHHHHHHHHHHHHT S GGG S SSB : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbebebeebebeeeeeeb: Contact :bbb b b queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7krp_A_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : TTGGGT BHHHHHHSS HHHHHHHHHHHTTS EEEEEE S BSS S EEEE HHHHHHHHHHHHHHHHHHTT SSSB S STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbbebb: Contact : bb bb bb b queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7krp_A_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSEEEEE TTTTTS HHHHHHHHHHHTSS SSSS HHHHHHHHHHHHHHTTS EEE SS EEE SS TTSTTSHHHHHHHHHHHHHHH: ExpBur :eebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbb: Contact : b b queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7krp_A_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHSS SSS HHHHHHHHHHHHHHTS S HHHHHHHHHHHHHHS EEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EEE: ExpBur :bbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbeb: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7krp_A_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr :S GGG S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSSTT STTHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeebeeeeeee: queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7krp_A_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SSS SS TTTTSHHHHHGGG TT : ExpBur :eeeeeeeeebeebbeeeebeebbeeee: |