#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [914 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [114 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 274D 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 506F 509W 514L 515Y 518S 523D (identity: 100.0 %/98.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bzf_A_1 identity=98.4% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 7bzf_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : HHHHHHHHHHHTTS S EE S SS S EEEE SS EEEE S EEEEEEGGGEEEEEEEEB HHHHHHHHHHHTTTSSSSS : ExpBur :eeeeeebbeebbeebeeebbeeeeeebeeeeebbebeeeeebbbbbbbebeebbbbbbeeeeeeeebbbbbbbebeeeebeebeebbeebeebebbbebe: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 7bzf_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr : EEEBTTSS EEE B S SS HHHHHHHHHS TTT TTTTTTTTTTSS GGGTTSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT: ExpBur :bbeeebeeeebebbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebeebbeebbeebbebbbbbbebbeebeebb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 7bzf_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGB TTS B TTS EE STT EE HHHHHHHGGGTTTTTTTSSTTBSSSSSSS B TT HHHHHHHHHHH TT SS SSSTT: ExpBur :bebbbbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbebebbbbbee: Contact : bb bb queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 7bzf_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHTSSS TTS EEEEEEEEETTEEEEEEEEEE SSS EE SS S BS HHHHHHHHHSSHHHHSSSEE SS S EEEE: ExpBur :beebbbbbbbbbbbbbbbebbbeebbeebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeeeeebbbebbbbebeeeeeebebeebebebbbb: Contact : bbbb bbbbb bbbb b bb bb bbbbbbbbbbbbbbb b b b queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 7bzf_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr : SSS B B HHHHHHHHTT S TT S B B STTHHHHHGGGGG HHHHHHHHHHHHHHTTT STT S TTS: ExpBur :eeeeeeeeebeeebeebebeebbeeeebbeeeeebebebebeeeebebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbbbebeebeeeeeee: Contact : bbbb b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 7bzf_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeebbeebbebbbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbbbbbbebbebbeeeeeebbbbeeeebebbbee: Contact : b b bb b b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 7bzf_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHTSS SSEEEEE TTHHHH HHHHHHHHHHHHTT SSS HHHHHHHHHHHHHHHTS EEE SSEEEE SS TT TTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbb: queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 7bzf_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHSSS GGG SSHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEE EETTEEEEEEEHHHHHHTSS HHHHHHHHHHHTS TTS : ExpBur :bbbbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :************************************************************************************************ : 7bzf_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXX: 900 SecStr : B SSS S BTTBEEEEEESSS EEEEEE HHHHHHHHH BSSTT TTSSTHHHHHHHHSSS GGGGSSSHHHHHHHHHHHHHHHHHHHHH ----: ExpBur :ebeeeeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeebeeebbeebbebbeebbbbeeeeeeeebebbebbbebbeebeeeee----: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 : ******************: 7bzf_A_1 901:XXXXXXXXXXXTSRYWEPEFYEAMYTPHT: 929 SecStr :----------- TTSSTTTTGGGS : ExpBur :-----------eeeebeeebbeebbeeee: |