#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [853 aa] | nsp12 :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [186 aa] | nsp8 :R1AB_SARS2 | 270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 344T 368F 371L 372L 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 396F 398V 402T 403N 405V 407F 508K 509W 514L 515Y 517D 518S 523D 675V (identity: 100.0 %/94.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6yyt_A_1 identity=94.9% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130 :******************** ********************* *************: 6yyt_A_1 34:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXFSNYQHEETIYNLLKDCPAVAXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 133 SecStr : EEEEEEESSS EEEEEEE -------------------------- HHHHHHHHHHHHTSS TTB -------------------- SSBHHHHHHH: ExpBur :eeebbbeeeeebbbbbebee--------------------------eeeeeeeeebeeebeebebbe--------------------eebebbbbbbbbb: queryA 131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230 :****************************************************************************************************: 6yyt_A_1 134:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 233 SecStr :HHS SS HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEEE GGGBBSSS B S EE STT : ExpBur :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbbbbebbebbeebbbebbbbbbbbbbebbbebbeebeeeeeeeb: queryA 231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330 :****************************************************************************************************: 6yyt_A_1 234:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 333 SecStr : EE HHHHHHHHHHHHHHTGGGGGGBTTS SSS B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHHTTTS TTT EEEE: ExpBur :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebe: Contact : bbbb bbbb bbb queryA 331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430 :****************************************************************************************************: 6yyt_A_1 334:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 433 SecStr :EEEEETTEEEEEEEEEEETTTEEEE S SB HHHHHHHHH HHHHHHHSEE SSSSS EEEESSSS HHHHHHHHHTT S : ExpBur :eebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbbbbbbbebeeeeeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebee: Contact :bb bbb b b bb bbbbbbb bbbb bb b b bb b b queryA 431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530 :****************************************************************************************************: 6yyt_A_1 434:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 533 SecStr :TT S B GGGHHHHHGGGGG HHHHHHHHHHHHGGGSSS GGG S SSSB TTGGGT BHHHHHHHS HHHHHHHHHH: ExpBur :eebebebebebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbeb: Contact : bb bb bb b queryA 531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630 :****************************************************************************************************: 6yyt_A_1 534:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 633 SecStr :HTTS EEEEEE BSSSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTSS SSEEEEE TTHHHH HHH: ExpBur :bbebbbbbbbbbebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebbebbbeebbeebbeebeeeebbbbebeebebbbbbbb: queryA 631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730 :****************************************************************************************************: 6yyt_A_1 634:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 733 SecStr :HHHHHHHHHTT SSSS HHHHHHHHHHHHHHTTS EEEETTEEEE S SSSTTSHHHHHHHHHHHHHHHHHHHHHTS SSS HHHHHHHHHHHHH: ExpBur :bbbbbbbbbebbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb: Contact : b queryA 731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830 :****************************************************************************************************: 6yyt_A_1 734:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 833 SecStr :HHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHTT TTS EEES TTT S SSS EEEEEESSS EEEEE: ExpBur :bbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebbbbebebeeeebbbb: queryA 831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************************************************************************************: 6yyt_A_1 834:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 932 SecStr :E HHHHHHHHH SSSHHHHSS HHHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS STTGGGGGGGSHHHHHGGG TT : ExpBur :bbebbebbbbbbbbeeeeebeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebbeebbeeeeeeeeeeeeeeebeeebeeeebeebbeeee: |