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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(7msw_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
244 | R | 64 | 64 | R | E | b | 7.5 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | A 1 (A) | polymer(polypeptide(L)) [635 aa] | Non-structural protein 2 :R1AB_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7msw_A_1 identity=68.3% |
queryA 184:RYVDNNFCGPDGYPLDCIKDFLARAGKSMCTLSEQLDYIESKRGVYCCRDHEHEIAWFTERSDKSYEHQTPFEIKSAKKFDTFKGECPKFVFPLNSKVKV: 283 :*************** **** ****** ******** * ******** ******* **** **** ******* ******* **** ******* * : 7msw_A_1 4:RYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKT: 103 SecStr : EETTSB TTSSB HHHHHHHHHTT TTS HHHHHHHHHHTTGGGSSSS EEEEEEE SS GGG GGGEEEEEE TT S SS TTEEEEE: ExpBur :eebbebbbbeebbbeebbeebbeeeeeeebebeebbebbeeeebeebbeeeebebbbebebbeebbbebebbbbeebeebeebeeebeebbbbbebebee: queryA 284:IQPRVEKKKTEGFMGRIRSVYPVASPQECNNMHLSTLMKCNHCDEVSWQTCDFLKATCEHCGTENLVIEGPTTCGYLPTNAVVKMPCPACQDPEIGPEHS: 383 :********* *************** *** * ******* ** * **** ** ***** ****** ** ******* ***** **** * *****: 7msw_A_1 104:IQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHS: 203 SecStr : SS HHHHHHHHHS SSGGG EE EEEEEE TTT EEEEEE SSEEE TTT EEE SS EEE S TTEEEEEE HHHH TTT SS : ExpBur :eeeeebeeeeeebbeebeebbebeebeebeebbbbbebebeeeeeebbbbebbeebebbebeeebeeeebbbbbbbebebbbbebebebbeeeeebeebe: queryA 384:VADYHNHSNIETRLRKGGRTRCFGGCVFAYVGCYNKRAYWVPRASADIGSGHTGITGDNVETLNEDLLEILSRERVNINIVGDFHLNEEVAIILASFSAS: 483 : * *** * * ******* ****** **** ** ********* ** *** * * ** ***** * ********* **** **********: 7msw_A_1 204:LAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSAS: 303 SecStr :HHHHHHHH EEETTEEEEEETTEEEEEEEEETTEEEEEEEEEEESSTT EESTTHHHHHHHHHHHHSSSSEEEEEESS B HHHHHHHHTT SS: ExpBur :eeebbeebebeeeeeeeeebbebbbbbbbbbbbeeeebbbbbebbbebbbebbbbbbeebeeebeebbebbeeeebebbbeeebebbbbbbbbbbeebee: queryA 484:TSAFIDTIKSLDYKSFKTIVESCGNYKVTKGKPVKGAWNIGQQRSVLTPLCGFPSQAAGVIRSIFARTLDAANHSIPDLQRAAVTILDGISEQSLRLVDA: 583 :**** * * **** ** ******* ****** ******* * * * ** * * ** * **** *** * * ** ** ******* **** **: 7msw_A_1 304:TSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDA: 403 SecStr :HHHHHHHTTT HHHHHHHHHTTSSEEEEEES TTSEEESS S SSTT SHHHHHHHHHTT SS HHHHHHHHHHHHHHH TTHHHHHHH: ExpBur :beebbeebeebebeebeeebeeeeebebeeeeeeebbbebeeeeebbebbbbbbbebbebbbbbbbbebeeeeeebeebbeebeeebeebbeebeebbeb: queryA 584:MVYTSDLLTNSVIIMAYVTGGLVQQTSQWLSNLLGTTVEKLRPIFEWIEAKLSAGVEFLKDAWEILKFLITGVFDIVKGQIQVASDNIKDCVKCFIDVVN: 683 :* **** ** *** *** ** ***** * ** *** * * * * ***** * *** ** * ** *** ** * * **: 7msw_A_1 404:MMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVN: 503 SecStr :HHHHS B HHHHHHHHTTHHHHHHHHHHHHHSS TTTHHHHHHHHHHGGGGGGGHHHHHHHHHHHHT EEETTEEE SS HHHHHHHHHHH: ExpBur :bbeebebebebebbbbbbbbebbeebbebbeebbeeebeebeebbeebeebbeebeebbeebbbbbbbbeeeebebebbebeeeeeeeeebbeebbebbb: queryA 684:KALEMCIDQVTIAGAKLRSLNLGEVFIAQSKGLYRQCIRGKEQLQLLMPLKAPKEVTFLEGDSHDTVLTSEEVVLKNGELEALETPVDSFTNGAIVGTPV: 783 :* * * * * **** ***** * ****** * * ********** **** * ****** * * ** * *****: 7msw_A_1 504:KFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPV: 603 SecStr :HHHHTTEEEEEETTEEEEEEESSS EEETTTEEEEEEEEEGGGT B TTS SEEEEEEE EE S SB EEE EEE S TT SS EEEE: ExpBur :eebeebeeebebbebebebbebeebbbbebebebeebeeeeeebebebeeebeeebebbeeebeebeeeeeebeeeeeebebbeebeeebebeeeebebb: queryA 784:CVNGLMLLEIKDKEQYCALSPGLLATNNVFRLKGG: 818 :* ********** * **** * *** * ****: 7msw_A_1 604:CINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGG: 638 SecStr :EETTEEEEEETTSS EEEE TTS EEEEEEEETT : ExpBur :bbebbbbbebeeeebbbbbbeebebbbbbbebeee: |