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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | D 1 (D) | polymer(polypeptide(L)) [313 aa] | Replicase polyprotein 1ab :R1AB_CVHSA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5tl7_D_1 identity=100.0% |
queryA 1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642 :****************************************************************************************************: 5tl7_D_1 7:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 106 SecStr : EEEEEEESSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTEE: ExpBur :eebebebbeebeeeeeeebebeebbeeeeeebbbebeebbeeebeeebeeeebbbeeeeeeeeeebeeebebeeebbbbbbebbbbebeebebeebeebb: queryA 1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742 :****************************************************************************************************: 5tl7_D_1 107:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 206 SecStr : S TT HHHHHHHHHHTTS BSSHHHHHHHHHHHHT HHHHHHHHHHHT TT HHHHHHHHGGGBS TT EEEEEEEETTTEEEEEEEETH: ExpBur :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbebbebeebebbbbbebeeeeeeeeebeeb: queryA 1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842 :****************************************************************************************************: 5tl7_D_1 207:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 306 SecStr :HHHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEE: ExpBur :ebbbbeebbbbeebbebbeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeeeeebebebbb: queryA 1843:VFYKETSYTTTIK:1855 :*************: 5tl7_D_1 307:VFYKETSYTTTIK: 319 SecStr :EEEE SEEE : ExpBur :bbbebeebebeee: |