[pdbjlvh2]Protein Model on 5e6j_D_1_E

Protein Model on 5e6j_D_1_E_1 (TEMPLATE: 5e6j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS)	D 1 (D)	polymer(polypeptide(L)) [313 aa]	Replicase polyprotein 1ab :R1AB_CVHSA
2	b		E 1 (E)	polymer(polypeptide(L)) [76 aa]	ubiquitin :UBC_HUMAN	1646W 1649N 1650N 1651C 1652Y 1702L 1703G 1704D 1706R 1707E 1739L 1743E 1747Y 1748M 1763P 1765V 1772Q 1788P 1804Y 1808Y 1809Q 1810C 1811G 1813Y 1841T (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5e6j_D_1 identity=100.0%

queryA      1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642
                :****************************************************************************************************:
5e6j_D_1       4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103
SecStr          : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE SSS   GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE:    
ExpBur          :eebebebbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    

queryA      1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742
                :****************************************************************************************************:
5e6j_D_1     104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203
SecStr          :   S SS HHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  TT EEEEEEE SSS  EEEEEEGG:    
ExpBur          :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebeeeeeeebeebbeebbebbebeebebbbbeebeeeeeeeeeeeeb:    
Contact         :   b  bbbb                                                 bbb bb                               b   

queryA      1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842
                :****************************************************************************************************:
5e6j_D_1     204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303
SecStr          :GGTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEES EEEEEEE:    
ExpBur          :ebbbbeebbbbeebeeeeeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeeebbebebeeeeeeeebebebbb:    
Contact         :b   bb              b b      b               b               b   bbbb b                           b 

queryA      1843:VFYKETSYTTTIK:1855
                :*************:
5e6j_D_1     304:VFYKETSYTTTIK: 316
SecStr          :EEEE SEEE    :    
ExpBur          :bbbebeeeebeee:

Protein Model on 5e6j_D_1_E_1 (TEMPLATE: 5e6j )

Input Residue Numbers for Focused Sites