[pdbjlvh2]Protein Model on 8hus_B

Protein Model on 8hus_B_1 (TEMPLATE: 8hus )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(R1A_SARS)	B 1 (B)	polymer(polypeptide(L)) [298 aa]	3C-like proteinase nsp5 :R1A_SARS

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8hus_B_1 identity=100.0%

queryA      3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341
                :****************************************************************************************************:
8hus_B_1       1:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 100
SecStr          :         HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  GGGSSS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  EE:    
ExpBur          :eeeeeeeebeebebbbbebebeeeebbbbbbeeebbbbeebbbeeeeeeebebeeebeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebee:    

queryA      3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441
                :****************************************************************************************************:
8hus_B_1     101:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT: 200
SecStr          :EE    TT EEEEEEEETTEEEEEEEEEB TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SSSS        B H:    
ExpBur          :eeeebeebebbbbbbbeebeeeeeeebbbbbeebbebebeeebebbbbbeeeeeebbbbbbbbeebeeebbbbbbbebebbeebebeeeeeeeeeebebb:    

queryA      3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ:3539
                :**************************************************************************************************:
8hus_B_1     201:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQ: 298
SecStr          :HHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  SS  BTTBSS   S  HHHHHH :    
ExpBur          :bbbbbbbbbbbeeeeeebeeeeebeeeebeeebeeeeeeebeeeeeeebeebbeebebebeebbbbbebbeeeeeeeeebeeeeeeebbbebeebeee:

Protein Model on 8hus_B_1 (TEMPLATE: 8hus )

Input Residue Numbers for Focused Sites