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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(7lfv_B auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
1856 | P | 317 | 317 | P | e | 92.2 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | B 1 (A) | polymer(polypeptide(L)) [314 aa] | papain-like protease :R1A_SARS |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7lfv_B_1 identity=100.0% |
queryA 1543:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT:1642 :****************************************************************************************************: 7lfv_B_1 4:KTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLT: 103 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE: ExpBur :eebebebbbbeeeeeeeebebeebbeeebeebbbebeebeeeebeeebeeeebbbbeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebb: queryA 1643:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV:1742 :****************************************************************************************************: 7lfv_B_1 104:SIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGV: 203 SecStr : S TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHHTB TT EEEEEEEETTTEEEEEEEEGG: ExpBur :bbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbeebebeebebbbbeebeeeeeeeeeeebb: queryA 1743:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD:1842 :****************************************************************************************************: 7lfv_B_1 204:EAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTD: 303 SecStr :GGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEESSEEEEEEE: ExpBur :ebbbbeebbbbeebbeebeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebbbeeeeebeebebebbb: queryA 1843:VFYKETSYTTTIKP:1856 :**************: 7lfv_B_1 304:VFYKETSYTTTIKP: 317 SecStr :EEEE SEEE : ExpBur :bbbebeeeebeeee: |