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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [300 aa] | Replicase polyprotein 1a :R1A_CVHSA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7k0h_B_1 identity=99.7% |
queryA 3242:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY:3341 :****************************************************************************************************: 7k0h_B_1 9:GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKY: 108 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG GGGSSS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT EE: ExpBur :eeeeeeeebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeebeeeebebbeeeeebbbeeeeebebbbebebeeebeebbee: queryA 3342:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTIT:3441 :***************************************************************************************** **********: 7k0h_B_1 109:KFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTXQAAGTDTTIT: 208 SecStr :EE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SS - B H: ExpBur :eeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebeeebbbbbbbbbbebeeebbbbbbbebbbbeebebeee-eeeeeebebb: queryA 3442:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS:3541 :****************************************************************************************************: 7k0h_B_1 209:LNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCS: 308 SecStr :HHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHH HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHHT: ExpBur :bbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeebeeebeebbeeeebebeebbbbbbebbeeebeebebeeeeeeebebbbebbebeee: queryA 3542:G:3542 :*: 7k0h_B_1 309:G: 309 SecStr : : ExpBur :e: |