CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | B 1 (D) | polymer(polypeptide(L)) [312 aa] | Replicase polyprotein 1ab :R1AB_CVHSA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5tl6_B_1 identity=100.0% |
queryA 1544:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS:1643 :****************************************************************************************************: 5tl6_B_1 8:TIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTS: 107 SecStr : EEEEEESSSSSEEEEEE TTS HHHHTSSEESSSSB TTS GGGTT EEEE STTTTHHHHHHH SSHHHHHHHHHHHHTT EETTEE : ExpBur :eeebbbbbbeeeeeeeebeeeebbeeeeeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbb: queryA 1644:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE:1743 :****************************************************************************************************: 5tl6_B_1 108:IKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVE: 207 SecStr : S TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHHT HHHHHHHHHHHT TT HHHHHHHHHHSB TT EEEEEEEETTTEEEEEEEETHH: ExpBur :beeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbbbbbbbbbbbebeeeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeeebe: queryA 1744:AVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV:1843 :****************************************************************************************************: 5tl6_B_1 208:AVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDV: 307 SecStr :HHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEE: ExpBur :bbbbeebbbbeebbeebeeebeeeeebebbbebbebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebbbbbbeebbbebebeeeeeeeebebebbbb: queryA 1844:FYKETSYTTTIK:1855 :************: 5tl6_B_1 308:FYKETSYTTTIK: 319 SecStr :EEE SEEE : ExpBur :bbebeebebeee: |