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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(4mm3_B auth_asym_id:B) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
1698 | T | 159 | 159 | T | e | 57.8 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(R1A_SARS) | B 1 (B) | polymer(polypeptide(L)) [316 aa] | Papain-like proteinase :R1A_CVHSA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4mm3_B_1 identity=100.0% |
queryA 1541:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG:1640 :****************************************************************************************************: 4mm3_B_1 2:EVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGG: 101 SecStr : S EEESSSSS EE SS SHHHH SEEETTEEGGG SS SS EEEE SSSHHHHHHHHH STHHHHHHHHHHHHTTS EETT: ExpBur :eeeebebebbbbeeeeeeeebeeeeebeeeeeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebee: queryA 1641:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT:1740 :****************************************************************************************************: 4mm3_B_1 102:LTSIKWADNNCYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLT: 201 SecStr :EE S TT HHHHHHHHHHTTS BSSHHHHHHHHHHTTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEE: ExpBur :bbbbeebeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbeeebeeeeebeebbeebbebbebeebebbbbbebeeeeeeeeeee: queryA 1741:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV:1840 :****************************************************************************************************: 4mm3_B_1 202:GVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPV: 301 SecStr :GGGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEE: ExpBur :ebebbbbeebbbbeebbeebeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebebbbbeeeeeeeeebbbbbeeebbbebebeeeeeeeebebbb: queryA 1841:TDVFYKETSYTTTIK:1855 :***************: 4mm3_B_1 302:TDVFYKETSYTTTIK: 316 SecStr :EEEEEE SEEE : ExpBur :bbbbbebeebeeeee: |